RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PTX3P26022 381 aaPredicted RBP20.21■□□□□ 0.83
COL18A1-207ENST00000473212 WEE1P30291 646 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 PRIM2P49643 509 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 KCNC3Q14003 757 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 CCDC190Q86UF4 302 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 RASGRP3Q8IV61 690 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 RAVER1Q8IY67 606 aaKnown RBP20.21■□□□□ 0.83
COL18A1-207ENST00000473212 WDR48Q8TAF3 677 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 OR51B5Q9H339 312 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 NEK6Q9HC98 313 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 MAP4K5Q9Y4K4 846 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 ALPK3Q96L96 1907 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 PNMA8CA0A1B0GUJ8 204 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 KPNA5O15131 536 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 PSIP1O75475 530 aaKnown RBP20.2■□□□□ 0.82
COL18A1-207ENST00000473212 CCNKO75909 580 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 TGFB1P01137 390 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 HSD3B1P14060 373 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 HSD3B2P26439 372 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 TIA1P31483 386 aaKnown RBP eCLIP20.2■□□□□ 0.82
COL18A1-207ENST00000473212 PIK3CBP42338 1070 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 COPZ1P61923 177 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 DEFB103AP81534 67 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 TEKQ02763 1124 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 SYTL3Q4VX76 610 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 ARSIQ5FYB1 569 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 RSBN1Q5VWQ0 802 aaPredicted RBP20.2■□□□□ 0.82
COL18A1-207ENST00000473212 ARMCX6Q7L4S7 300 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 CACTIN-AS1Q8N1I8 211 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 ZNF558Q96NG5 402 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 SLX1AQ9BQ83 275 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 SORBS1Q9BX66 1292 aaKnown RBP20.2■□□□□ 0.82
COL18A1-207ENST00000473212 TP63Q9H3D4 680 aaPredicted RBP20.2■□□□□ 0.82
COL18A1-207ENST00000473212 ACER3Q9NUN7 267 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 GULP1Q9UBP9 304 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 PLXND1Q9Y4D7 1925 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 APOA1P02647 267 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 KRR1Q13601 381 aaKnown RBP20.2■□□□□ 0.82
COL18A1-207ENST00000473212 SPIN4Q56A73 249 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 MPP7Q5T2T1 576 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 C6orf183Q5T699 404 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 METTL3Q86U44 580 aaKnown RBP20.2■□□□□ 0.82
COL18A1-207ENST00000473212 ATCAYQ86WG3 371 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 YME1L1Q96TA2 773 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 CPEB1Q9BZB8 566 aaKnown RBP20.2■□□□□ 0.82
COL18A1-207ENST00000473212 THSD1Q9NS62 852 aa20.2■□□□□ 0.82
COL18A1-207ENST00000473212 PRAMEF33A0A0G2JMD5 474 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 LOC110117498-PIK3R3F6TDL0 507 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 ARHGAP33O14559 1287 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 PRAMEF10O60809 474 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 CTSLP07711 333 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 S100A1P23297 94 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 ETV6P41212 452 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 METAP1P53582 386 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 CDC42P60953 191 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 SLC7A9P82251 487 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 WDR36Q8NI36 951 aaKnown RBP20.19■□□□□ 0.82
COL18A1-207ENST00000473212 TCEAL4Q96EI5 215 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 METTL2AQ96IZ6 378 aaKnown RBP20.19■□□□□ 0.82
COL18A1-207ENST00000473212 CEP19Q96LK0 163 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 CDCA4Q9BXL8 241 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 MOV10Q9HCE1 1003 aaKnown RBP20.19■□□□□ 0.82
COL18A1-207ENST00000473212 HCN4Q9Y3Q4 1203 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 ITGA2P17301 1181 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 POU1F1P28069 291 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 PTCHD4Q6ZW05 846 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 C2orf73Q8N5S3 287 aaPredicted RBP20.19■□□□□ 0.82
COL18A1-207ENST00000473212 AQP11Q8NBQ7 271 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 ZNF740Q8NDX6 193 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 OR52N2Q8NGI0 321 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 C9orf43Q8TAL5 461 aaPredicted RBP20.19■□□□□ 0.82
COL18A1-207ENST00000473212 TMEM159Q96B96 161 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 PIP5K1AQ99755 562 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 SLC25A13Q9UJS0 675 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 CFL2Q9Y281 166 aa20.19■□□□□ 0.82
COL18A1-207ENST00000473212 EFCAB10A6NFE3 127 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 CCRL2O00421 344 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 GPX5O75715 221 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 SNX4O95219 450 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 SSX1Q16384 188 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 AGAP6Q5VW22 663 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 ZDHHC20Q5W0Z9 365 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 NLRP8Q86W28 1048 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 RNF130Q86XS8 419 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 PIK3R3Q92569 461 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 AGAP4Q96P64 663 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 BHLHE41Q9C0J9 482 aaPredicted RBP20.18■□□□□ 0.82
COL18A1-207ENST00000473212 REEP4Q9H6H4 257 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 FAM47E-STBD1D6RA91 191 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 KLHL18O94889 574 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 CCNB2O95067 398 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 GADD45GO95257 159 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 GASTP01350 101 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 XCR1P46094 333 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 CDK6Q00534 326 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 GRIN2CQ14957 1233 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 HENMT1Q5T8I9 393 aaKnown RBP20.18■□□□□ 0.82
COL18A1-207ENST00000473212 ZNF513Q8N8E2 541 aaPredicted RBP20.18■□□□□ 0.82
COL18A1-207ENST00000473212 ZNF480Q8WV37 535 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 SLC30A2Q9BRI3 323 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms