RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 TMEM65Q6PI78 240 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 PLET1Q6UQ28 207 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 PLEKHM3Q6ZWE6 761 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 SYT13Q7L8C5 426 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 PRSS42Q7Z5A4 293 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 TMEM150AQ86TG1 271 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 CDH24Q86UP0 819 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 ZSWIM9Q86XI8 627 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 PLPP6Q8IY26 295 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 CRYBG2Q8N1P7 616 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 STX19Q8N4C7 294 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 NPWQ8N729 165 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 OR4M2Q8NGB6 313 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 OR8K5Q8NH50 307 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 SLC13A3Q8WWT9 602 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 GGHQ92820 318 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 KIAA1191Q96A73 305 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 TNIP3Q96KP6 325 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 SPNS1Q9H2V7 528 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 IL1RAPQ9NPH3 570 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 UTS2RQ9UKP6 389 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 STUB1Q9UNE7 303 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 DERAQ9Y315 318 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 HSPB11Q9Y547 144 aa9.7□□□□□ -0.86
APTX-216ENST00000472896 DSPP15924 2871 aaKnown RBP9.7□□□□□ -0.86
APTX-216ENST00000472896 CACNA1EQ15878 2313 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 NBEAQ8NFP9 2946 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 CITO14578 2027 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 ASPMQ8IZT6 3477 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 TUBAL3A6NHL2 446 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 I3L521 148 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 PPEF2O14830 753 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 MYL12BO14950 172 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 HCN1O60741 890 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 CYP7B1O75881 506 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 CCNDBP1O95273 360 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 S1PR4O95977 384 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 ATF6P18850 670 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 MYL12AP19105 171 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 GGT2P36268 569 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 SLC19A1P41440 591 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 DGKEP52429 567 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 PER3P56645 1201 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 CSTF3Q12996 717 aaKnown RBP9.69□□□□□ -0.86
APTX-216ENST00000472896 OR4D1Q15615 310 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 ZNF79Q15937 498 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 COL28A1Q2UY09 1125 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 GLYR1Q49A26 553 aaPredicted RBP9.69□□□□□ -0.86
APTX-216ENST00000472896 CARD16Q5EG05 197 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 ZNF789Q5FWF6 425 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 C10orf62Q5T681 223 aaPredicted RBP9.69□□□□□ -0.86
APTX-216ENST00000472896 LCN1P1Q5VSP4 162 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 CACHD1Q5VU97 1274 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 RANBP10Q6VN20 620 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 KDELC2Q7Z4H8 507 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 CMTM8Q8IZV2 173 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 PGBD3Q8N328 593 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 DUSP18Q8NEJ0 188 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 OR8H1Q8NGG4 311 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 ELMO1Q92556 727 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 EXT2Q93063 718 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 FAM149B1Q96BN6 582 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 COQ8BQ96D53 544 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 PGAP3Q96FM1 320 aaPredicted RBP9.69□□□□□ -0.86
APTX-216ENST00000472896 ITCHQ96J02 903 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 NSUN5Q96P11 429 aaKnown RBP9.69□□□□□ -0.86
APTX-216ENST00000472896 BBS2Q9BXC9 721 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 FSD1LQ9BXM9 530 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 HDHD5Q9BXW7 423 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 TPSD1Q9BZJ3 242 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 C11orf54Q9H0W9 315 aaPredicted RBP9.69□□□□□ -0.86
APTX-216ENST00000472896 ZNF304Q9HCX3 659 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 RASSF1Q9NS23 344 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 VNN3Q9NY84 501 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 PDP1Q9P0J1 537 aaPredicted RBP9.69□□□□□ -0.86
APTX-216ENST00000472896 VAPAQ9P0L0 249 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 U3KQV3 271 aa9.69□□□□□ -0.86
APTX-216ENST00000472896 A0A1B0GVM2 712 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 SUPT3HB4E1H0 165 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 WNT9AO14904 365 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 AKR7A2O43488 359 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 KLK8O60259 260 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 SLC43A1O75387 559 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 FGF19O95750 216 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 IL6P05231 212 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 IFI30P13284 250 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 ITGB6P18564 788 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 DRD1P21728 446 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 GJA4P35212 333 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 RRAS2P62070 204 aaPredicted RBP9.68□□□□□ -0.86
APTX-216ENST00000472896 PPP1R8Q12972 351 aaKnown RBP9.68□□□□□ -0.86
APTX-216ENST00000472896 MAD2L1Q13257 205 aaPredicted RBP9.68□□□□□ -0.86
APTX-216ENST00000472896 KLHL12Q53G59 568 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 CLLU1Q5K131 121 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 PDZK1Q5T2W1 519 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 OVOS1Q6IE37 1185 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 ARSKQ6UWY0 536 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 GPRIN3Q6ZVF9 776 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 PIP4P1Q86T03 277 aa9.68□□□□□ -0.86
APTX-216ENST00000472896 ADGRG3Q86Y34 549 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms