RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 MMACHCQ9Y4U1 282 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 PCDHGB3Q9Y5G1 929 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 STAB1Q9NY15 2570 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 TRGV5A0A0B4J1U4 118 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 H7C1Q1 480 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 LIASO43766 372 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 NPPBP16860 134 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 CCND1P24385 295 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 CCR8P51685 355 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 NAE1Q13564 534 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 HECTD2Q5U5R9 776 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 AGTRAPQ6RW13 159 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 RTL4Q6ZR62 310 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 FAM47EQ6ZV65 393 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 PIWIL4Q7Z3Z4 852 aaKnown RBP17.59■□□□□ 0.41
SORT1-203ENST00000471996 STRA8Q7Z7C7 330 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 CILP2Q8IUL8 1156 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 CCDC170Q8IYT3 715 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 ULK2Q8IYT8 1036 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 NAXEQ8NCW5 288 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 OR4K1Q8NGD4 311 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 ALKBH8Q96BT7 664 aaKnown RBP17.59■□□□□ 0.41
SORT1-203ENST00000471996 SGPP1Q9BX95 441 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 RHBGQ9H310 441 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 EXO5Q9H790 373 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 EIF2B3Q9NR50 452 aaKnown RBP17.59■□□□□ 0.41
SORT1-203ENST00000471996 INTS10Q9NVR2 710 aaKnown RBP17.59■□□□□ 0.41
SORT1-203ENST00000471996 DHRS7Q9Y394 339 aa17.59■□□□□ 0.41
SORT1-203ENST00000471996 TRBC2A0A5B9 178 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 CLCA1A8K7I4 914 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 INAFM1C9JVW0 142 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 WWP2O00308 870 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 RAB8AP61006 207 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 PPP2R2BQ00005 443 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 Q5PR19 223 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 POMZP3Q6PJE2 187 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 KIF18BQ86Y91 864 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 FBXW8Q8N3Y1 598 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 UBL4BQ8N7F7 174 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 GOLM1Q8NBJ4 401 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 LINC01560Q8TB33 94 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 KCNJ9Q92806 393 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 SCYL1Q96KG9 808 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 SGCZQ96LD1 299 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 TUBA8Q9NY65 449 aaPredicted RBP17.58■□□□□ 0.4
SORT1-203ENST00000471996 PAK5Q9P286 719 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 ZNF629Q9UEG4 869 aaPredicted RBP17.58■□□□□ 0.4
SORT1-203ENST00000471996 AMFRQ9UKV5 643 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 ZNF148Q9UQR1 794 aa17.58■□□□□ 0.4
SORT1-203ENST00000471996 GRID2IPA4D2P6 1211 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 AP3B1O00203 1094 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 AVILO75366 819 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 HRGP04196 525 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 MGAT1P26572 445 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 PPP2R1BP30154 601 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 CEACAM8P31997 349 aaPredicted RBP17.57■□□□□ 0.4
SORT1-203ENST00000471996 DNASE1L1P49184 302 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 TBX2Q13207 712 aaPredicted RBP17.57■□□□□ 0.4
SORT1-203ENST00000471996 KIAA0930Q6ICG6 404 aaPredicted RBP17.57■□□□□ 0.4
SORT1-203ENST00000471996 NEPROQ6NW34 567 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 MBOAT1Q6ZNC8 495 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 MAATS1Q7Z4T9 603 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 P3H2Q8IVL5 708 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 SCUBE1Q8IWY4 988 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 CA13Q8N1Q1 262 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 TNIP2Q8NFZ5 429 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 YIPF4Q9BSR8 244 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 HAUS8Q9BT25 410 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 SEMA4BQ9NPR2 832 aaPredicted RBP17.57■□□□□ 0.4
SORT1-203ENST00000471996 SACM1LQ9NTJ5 587 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 SYBUQ9NX95 663 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 ZFP69BQ9UJL9 534 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 PACSIN2Q9UNF0 486 aaPredicted RBP17.57■□□□□ 0.4
SORT1-203ENST00000471996 PDE10AQ9Y233 779 aa17.57■□□□□ 0.4
SORT1-203ENST00000471996 BTNL10A8MVZ5 291 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 SMIM10L1P0DMW3 83 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 HNF4AP41235 474 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 ZNF549Q6P9A3 640 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 PEX26Q7Z412 305 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 CPNE9Q8IYJ1 553 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 LRRC75A-AS1Q8N1F1 130 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 TBC1D19Q8N5T2 526 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 CCDC89Q8N998 374 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 CD200R1Q8TD46 325 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 SMIM10Q96HG1 83 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 GPR21Q99679 349 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 FRMD8P1Q9BZ68 369 aaPredicted RBP17.56■□□□□ 0.4
SORT1-203ENST00000471996 TRMT1Q9NXH9 659 aaKnown RBP17.56■□□□□ 0.4
SORT1-203ENST00000471996 ADAMTS6Q9UKP5 1117 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 SOX13Q9UN79 622 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 ATG4BQ9Y4P1 393 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 CLDN16Q9Y5I7 305 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 ATRQ13535 2644 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 HIVEP2P31629 2446 aa17.56■□□□□ 0.4
SORT1-203ENST00000471996 A0A1W2PPR1 153 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 URADA6NGE7 173 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 MIF4GDA9UHW6 222 aaKnown RBP17.55■□□□□ 0.4
SORT1-203ENST00000471996 TGFBR3LH3BV60 316 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 EIF3FO00303 357 aaPredicted RBP17.55■□□□□ 0.4
SORT1-203ENST00000471996 SMAD7O15105 426 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms