RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ABHD17AQ96GS6 310 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 SERPINI1Q99574 410 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 SLC29A3Q9BZD2 475 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 OR51B5Q9H339 312 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 C12orf65Q9H3J6 166 aaKnown RBP14.41□□□□□ -0.1
SDC3-203ENST00000471567 GSTO2Q9H4Y5 243 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 ELOVL6Q9H5J4 265 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 LYRM4Q9HD34 91 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 SSU72Q9NP77 194 aaKnown RBP14.41□□□□□ -0.1
SDC3-203ENST00000471567 C19orf25Q9UFG5 118 aaPredicted RBP14.41□□□□□ -0.1
SDC3-203ENST00000471567 ZNF225Q9UK10 706 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 RALYQ9UKM9 306 aaKnown RBP14.41□□□□□ -0.1
SDC3-203ENST00000471567 G3BP2Q9UN86 482 aaKnown RBP14.41□□□□□ -0.1
SDC3-203ENST00000471567 PCDHGA9Q9Y5G4 932 aaKnown RBP14.41□□□□□ -0.1
SDC3-203ENST00000471567 PCSK5Q92824 1860 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 CTIFO43310 598 aaKnown RBP14.4□□□□□ -0.1
SDC3-203ENST00000471567 TYROBPO43914 113 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 SPAG7O75391 227 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 DNAJB5O75953 348 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 OR4F21O95013 312 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 SEMA3DO95025 777 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 ESRRBO95718 433 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 ENO1P06733 434 aaKnown RBP14.4□□□□□ -0.1
SDC3-203ENST00000471567 HIST1H1TP22492 207 aaPredicted RBP14.4□□□□□ -0.1
SDC3-203ENST00000471567 ATP5A1P25705 553 aaKnown RBP14.4□□□□□ -0.1
SDC3-203ENST00000471567 CERS1P27544 350 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 RAP1GDS1P52306 607 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 EFNA3P52797 238 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 NAGLUP54802 743 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 RHAGQ02094 409 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 ZNF33BQ06732 778 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 CFAP157Q5JU67 520 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 FAAH2Q6GMR7 532 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 OR4C11Q6IEV9 310 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 TCTN3Q6NUS6 607 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 QSOX2Q6ZRP7 698 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 RNF175Q8N4F7 328 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 ACOT4Q8N9L9 421 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 C9orf43Q8TAL5 461 aaPredicted RBP14.4□□□□□ -0.1
SDC3-203ENST00000471567 TCP10LQ8TDR4 215 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 FAM111AQ96PZ2 611 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 ZNF700Q9H0M5 742 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 SLC25A18Q9H1K4 315 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 DAPP1Q9UN19 280 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 MMACHCQ9Y4U1 282 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 PCDHGB7Q9Y5F8 929 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 ACTL7BQ9Y614 415 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 MED13Q9UHV7 2174 aa14.4□□□□□ -0.1
SDC3-203ENST00000471567 IGHV1-45A0A0A0MS14 117 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 EIF4E1BA6NMX2 242 aaKnown RBP14.39□□□□□ -0.11
SDC3-203ENST00000471567 CLDN4O14493 209 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 PRMT3O60678 531 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 TRIM13O60858 407 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 B4GALT2O60909 372 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 SH3BGRLO75368 114 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 KRT6AP02538 564 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 KRT6BP04259 564 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 MYZAPP0CAP1 466 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 COX6A1P12074 109 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 CREB1P16220 341 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 SSR2P43308 183 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 KRT6CP48668 564 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 LIM2P55344 173 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 PCLAFQ15004 111 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 NSDHLQ15738 373 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 ZNF793Q6ZN11 406 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 FRMD7Q6ZUT3 714 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 CPEB2Q7Z5Q1 589 aaKnown RBP14.39□□□□□ -0.11
SDC3-203ENST00000471567 EXOC3L1Q86VI1 746 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 C10orf107Q8IVU9 208 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 ZCCHC7Q8N3Z6 543 aaKnown RBP14.39□□□□□ -0.11
SDC3-203ENST00000471567 GALNT16Q8N428 558 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 CDYL2Q8N8U2 506 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 METTL6Q8TCB7 284 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 SELENOMQ8WWX9 145 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 C8orf44Q96CB5 159 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 MTFMTQ96DP5 389 aaKnown RBP14.39□□□□□ -0.11
SDC3-203ENST00000471567 SLC25A23Q9BV35 468 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 RBCK1Q9BYM8 510 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 STMN4Q9H169 189 aaPredicted RBP14.39□□□□□ -0.11
SDC3-203ENST00000471567 CENPHQ9H3R5 247 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 BRF2Q9HAW0 419 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 MLXIPLQ9NP71 852 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 PRDM9Q9NQV7 894 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 RIC8BQ9NVN3 520 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 NMRK1Q9NWW6 199 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 AHSPQ9NZD4 102 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 KCMF1Q9P0J7 381 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 SLC17A7Q9P2U7 560 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 MRPS33Q9Y291 106 aaKnown RBP14.39□□□□□ -0.11
SDC3-203ENST00000471567 SPACA6W5XKT8 324 aa14.39□□□□□ -0.11
SDC3-203ENST00000471567 NSG1A0A0A6YYJ2 146 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 BLACEA4D250 179 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 SYNDIG1LA6NDD5 238 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 FAM227AF5H4B4 570 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 SAP18O00422 153 aaKnown RBP14.38□□□□□ -0.11
SDC3-203ENST00000471567 RTCAO00442 366 aaKnown RBP14.38□□□□□ -0.11
SDC3-203ENST00000471567 MANBAO00462 879 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 CYR61O00622 381 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 PLPP1O14494 284 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms