RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 LY6DQ14210 128 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 TUBB8Q3ZCM7 444 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 TCHHL1Q5QJ38 904 aaPredicted RBP18.62■□□□□ 0.57
HDAC7-220ENST00000471235 C10orf62Q5T681 223 aaPredicted RBP18.62■□□□□ 0.57
HDAC7-220ENST00000471235 TMEM205Q6UW68 189 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 TMEM102Q8N9M5 508 aaPredicted RBP18.62■□□□□ 0.57
HDAC7-220ENST00000471235 OR11G2Q8NGC1 345 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 C8orf44Q96CB5 159 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 MTFMTQ96DP5 389 aaKnown RBP18.62■□□□□ 0.57
HDAC7-220ENST00000471235 TBCDQ9BTW9 1192 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 MECRQ9BV79 373 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 SORBS1Q9BX66 1292 aaKnown RBP18.62■□□□□ 0.57
HDAC7-220ENST00000471235 SLC29A3Q9BZD2 475 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 ROGDIQ9GZN7 287 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 ING2Q9H160 280 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 ELOVL6Q9H5J4 265 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 SSU72Q9NP77 194 aaKnown RBP18.62■□□□□ 0.57
HDAC7-220ENST00000471235 FARSBQ9NSD9 589 aaKnown RBP18.62■□□□□ 0.57
HDAC7-220ENST00000471235 PSD3Q9NYI0 1048 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 SNX6Q9UNH7 406 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 ATRXP46100 2492 aa18.62■□□□□ 0.57
HDAC7-220ENST00000471235 UBFD1O14562 309 aaKnown RBP18.61■□□□□ 0.57
HDAC7-220ENST00000471235 COX6A1P12074 109 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 ATP5A1P25705 553 aaKnown RBP18.61■□□□□ 0.57
HDAC7-220ENST00000471235 PTX3P26022 381 aaPredicted RBP18.61■□□□□ 0.57
HDAC7-220ENST00000471235 RRADP55042 308 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 RAB38P57729 211 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 EEF1A2Q05639 463 aaKnown RBP18.61■□□□□ 0.57
HDAC7-220ENST00000471235 KCNAB2Q13303 367 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 CUL3Q13618 768 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 SGO1Q5FBB7 561 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 CFAP157Q5JU67 520 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 DCAF10Q5QP82 559 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 LANCL3Q6ZV70 420 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 ACOT4Q8N9L9 421 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 RGMAQ96B86 450 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 FER1L6-AS2Q96M78 137 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 SERPINI1Q99574 410 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 CENPKQ9BS16 269 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 ZNF717Q9BY31 904 aaPredicted RBP18.61■□□□□ 0.57
HDAC7-220ENST00000471235 ADNPQ9H2P0 1102 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 MID1IP1Q9NPA3 183 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 ACTL7BQ9Y614 415 aa18.61■□□□□ 0.57
HDAC7-220ENST00000471235 LOC102723996A0A087X1L8 192 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 A0A1W2PQ72 361 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 FAM227AF5H4B4 570 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 PSMD12O00232 456 aaPredicted RBP18.6■□□□□ 0.57
HDAC7-220ENST00000471235 MANBAO00462 879 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 PCDH17O14917 1159 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 TRIM13O60858 407 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 B4GALT2O60909 372 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 ESRRBO95718 433 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 PDYNP01213 254 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 ENO1P06733 434 aaKnown RBP18.6■□□□□ 0.57
HDAC7-220ENST00000471235 MYZAPP0CAP1 466 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 C8orf89P0DMQ9 161 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 H2AFXP16104 143 aaPredicted RBP18.6■□□□□ 0.57
HDAC7-220ENST00000471235 HIST1H1TP22492 207 aaPredicted RBP18.6■□□□□ 0.57
HDAC7-220ENST00000471235 JAK1P23458 1154 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 HMOX2P30519 316 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 ETV4P43268 484 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 HTR6P50406 440 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 LIM2P55344 173 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 AP5B1Q2VPB7 878 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 SOWAHCQ53LP3 525 aaPredicted RBP18.6■□□□□ 0.57
HDAC7-220ENST00000471235 OR4C11Q6IEV9 310 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 LSM14AQ8ND56 463 aaKnown RBP18.6■□□□□ 0.57
HDAC7-220ENST00000471235 ADAMTS18Q8TE60 1221 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 SELENOMQ8WWX9 145 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 TSLPQ969D9 159 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 KCNA7Q96RP8 456 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 CSF3RQ99062 836 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 HBEGFQ99075 208 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 GATA5Q9BWX5 397 aaPredicted RBP18.6■□□□□ 0.57
HDAC7-220ENST00000471235 SEMA4CQ9C0C4 833 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 DAPP1Q9UN19 280 aa18.6■□□□□ 0.57
HDAC7-220ENST00000471235 PIEZO2Q9H5I5 2752 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 SEMA3DO95025 777 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 HPP00738 406 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 TSFMP43897 325 aaKnown RBP18.59■□□□□ 0.57
HDAC7-220ENST00000471235 ARFIP1P53367 373 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 ASPHQ12797 758 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 PCOLCEQ15113 449 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 QSOX2Q6ZRP7 698 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 FAM47BQ8NA70 645 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 TMEM52Q8NDY8 209 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 PLPP5Q8NEB5 264 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 METTL21AQ8WXB1 218 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 VPS50Q96JG6 964 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 LYRM4Q9HD34 91 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 TNFRSF12AQ9NP84 129 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 TUBD1Q9UJT1 453 aa18.59■□□□□ 0.57
HDAC7-220ENST00000471235 CROCCQ5TZA2 2017 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 IGHV1-45A0A0A0MS14 117 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 EEDO75530 441 aaKnown RBP18.58■□□□□ 0.56
HDAC7-220ENST00000471235 CEACAM4O75871 244 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 KRT6AP02538 564 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 KRT6BP04259 564 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 BSGP35613 385 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 KRT6CP48668 564 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms