RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 AMD1P17707 334 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 RBMS1P29558 406 aaKnown RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 ALDH4A1P30038 563 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 RPL22P35268 128 aaKnown RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 NSG1P42857 185 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 KCNJ1P48048 391 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 FAM3BP58499 235 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 RPL15P61313 204 aaKnown RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 BNC1Q01954 994 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 CAV1Q03135 178 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 TMEM115Q12893 351 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 PRKAA1Q13131 559 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 GAB1Q13480 694 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 CHRNA6Q15825 494 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 CLPPQ16740 277 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 WHAMMP3Q1A5X7 153 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 ATP13A5Q4VNC0 1218 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 C14orf28Q4W4Y0 310 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 C4orf46Q504U0 113 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 PYCR3Q53H96 274 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 FNBP1LQ5T0N5 605 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 N4BP2L1Q5TBK1 243 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 PAPD7Q5XG87 772 aaKnown RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 PTRHD1Q6GMV3 140 aaKnown RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 FBXO42Q6P3S6 717 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 LRRC8BQ6P9F7 803 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 RBM44Q6ZP01 1051 aaKnown RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 DCDC5Q6ZRR9 648 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 TRIM74Q86UV6 250 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 PIM3Q86V86 326 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 LRRC6Q86X45 466 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 LSMEM2Q8N112 164 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 GPR26Q8NDV2 337 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 DDHD1Q8NEL9 900 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 OR4L1Q8NH43 312 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 ADAMTS18Q8TE60 1221 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 SKA2Q8WVK7 121 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 ADAMTS14Q8WXS8 1223 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 OR1E3Q8WZA6 343 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 TMEM159Q96B96 161 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 NXPE2Q96DL1 559 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 TRMT61AQ96FX7 289 aaKnown RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 SNF8Q96H20 258 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 REXO5Q96IC2 774 aaKnown RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 MS4A14Q96JA4 679 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 CAMK1GQ96NX5 476 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 TRAPPC9Q96Q05 1148 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 FYTTD1Q96QD9 318 aaKnown RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 RANBP9Q96S59 729 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 CCM2Q9BSQ5 444 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 FAM167BQ9BTA0 163 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 TSPYL1Q9H0U9 437 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 FGF22Q9HCT0 170 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 IL26Q9NPH9 171 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 MRPL40Q9NQ50 206 aaKnown RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 PPANQ9NQ55 473 aaKnown RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 SMOXQ9NWM0 555 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 SMARCAL1Q9NZC9 954 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 TAAR2Q9P1P5 351 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 GNPTGQ9UJJ9 305 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 ACSL5Q9ULC5 683 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 PYCARDQ9ULZ3 195 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 DNAJC16Q9Y2G8 782 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 GPR179Q6PRD1 2367 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 CTAGE15A4D2H0 777 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 OR2AG2A6NM03 316 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 B9A039 149 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 POC1B-GALNT4F8VUJ3 575 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 BUD23O43709 281 aaKnown RBP6.03□□□□□ -1.44
PTCD3-208ENST00000469585 APOA4P06727 396 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 CTAGE8P0CG41 777 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 F3P13726 295 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 BMP5P22003 454 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 ADRA1AP35348 466 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 MAPK9P45984 424 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 POLD2P49005 469 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 HMGA2P52926 109 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 FOXL2P58012 376 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 PROK1P58294 105 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 DNAJC3Q13217 504 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 EIF3IQ13347 325 aaKnown RBP6.03□□□□□ -1.44
PTCD3-208ENST00000469585 PTK6Q13882 451 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 CBFBQ13951 182 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 ITIH4Q14624 930 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 MORF4L2Q15014 288 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 TTLL9Q3SXZ7 439 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 GALNTL6Q49A17 601 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 GPRC6AQ5T6X5 926 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 HES3Q5TGS1 186 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 KCTD11Q693B1 232 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 FCRLBQ6BAA4 426 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 UGT3A1Q6NUS8 523 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 C8orf74Q6P047 294 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 TMEM65Q6PI78 240 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 TMEM220Q6QAJ8 160 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 DHRS13Q6UX07 377 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 CENPUQ71F23 418 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 DET1Q7L5Y6 550 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 CTAGE6Q86UF2 777 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 OOSP2Q86WS3 158 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms