RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 VEPH1Q14D04 833 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 LARS2Q15031 903 aaKnown RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 NCF4Q15080 339 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 AP5B1Q2VPB7 878 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 NHLRC3Q5JS37 347 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 TCTE1Q5JU00 501 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 RTP2Q5QGT7 225 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 TREML2Q5T2D2 321 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 TMEM198Q66K66 360 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SLC25A25Q6KCM7 469 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 TRMT10BQ6PF06 316 aaKnown RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 FAM198BQ6UWH4 519 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 B3GNT9Q6UX72 402 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 FAM131AQ6UXB0 335 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 LIPIQ6XZB0 460 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF534Q76KX8 674 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SHFQ7M4L6 423 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 OTOP1Q7RTM1 612 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 BMP8AQ7Z5Y6 402 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ZER1Q7Z7L7 766 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ADGRA1Q86SQ6 560 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 CUZD1Q86UP6 607 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ZDHHC17Q8IUH5 632 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PDZD9Q8IXQ8 264 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 LRRC56Q8IYG6 542 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ADGRF3Q8IZF5 1079 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 CYP4Z2PQ8N1L4 340 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 C12orf45Q8N5I9 185 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ARFGAP1Q8N6T3 406 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 TP53I13Q8NBR0 393 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 RDM1Q8NG50 284 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 OR52K2Q8NGK3 314 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 FBXO30Q8TB52 745 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF675Q8TD23 568 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SCARB1Q8WTV0 552 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ASB12Q8WXK4 309 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ACOT12Q8WYK0 555 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 KAT2AQ92830 837 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SEMA4DQ92854 862 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 COA7Q96BR5 231 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SLC25A36Q96CQ1 311 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 L3HYPDHQ96EM0 354 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PGAP3Q96FM1 320 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SCMH1Q96GD3 660 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ZBED3Q96IU2 234 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 CCDC17Q96LX7 622 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 TMEM68Q96MH6 324 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 VAT1Q99536 393 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 INPP5KQ9BT40 448 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 AMNQ9BXJ7 453 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 AMBRA1Q9C0C7 1298 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ZYG11BQ9C0D3 744 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 MCOLN1Q9GZU1 580 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SIK2Q9H0K1 926 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 KCNH6Q9H252 994 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SLC25A32Q9H2D1 315 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SMOC2Q9H3U7 446 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 KLHL31Q9H511 634 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ASB7Q9H672 318 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SLC28A3Q9HAS3 691 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PLAC1Q9HBJ0 212 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PDGFCQ9NRA1 345 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 MTMR10Q9NXD2 777 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SPHK1Q9NYA1 384 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 GTSE1Q9NYZ3 720 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PPP4R1LQ9P1A2 415 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 STOX2Q9P2F5 926 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 NDOR1Q9UHB4 597 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 DPP7Q9UHL4 492 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PSORS1C1Q9UIG5 152 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 RPS6KA6Q9UK32 745 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 CLEC4AQ9UMR7 237 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SSR3Q9UNL2 185 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SAMD4AQ9UPU9 718 aaKnown RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SLC6A5Q9Y345 797 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SAMHD1Q9Y3Z3 626 aaKnown RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 DMRT1Q9Y5R6 373 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ALG5Q9Y673 324 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 V9GYH0 126 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 RGPD3A6NKT7 1758 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 RGPD4Q7Z3J3 1758 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 UTRNP46939 3433 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ARFGEF1Q9Y6D6 1849 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 KCPQ6ZWJ8 1503 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 CYP2D7A0A087X1C5 515 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 IRGMA1A4Y4 181 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 WDR27A2RRH5 827 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 TRABD2BA6NFA1 517 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 SLC9B1P1A6NJY1 282 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 D6RAR5 112 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 NPIPB6E9PJ23 425 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF670-ZNF695F2Z2N8 137 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 FXYD1O00168 92 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 NR5A2O00482 541 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 NRP1O14786 923 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 LYRM1O43325 122 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 AKR7A2O43488 359 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 KIAA0513O60268 411 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 DLX3O60479 287 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 SLC22A3O75751 556 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms