RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 BRAT1Q6PJG6 821 aa15.13■□□□□ 0.01
TSPAN4-211ENST00000468468 DENND6BQ8NEG7 585 aa15.13■□□□□ 0.01
TSPAN4-211ENST00000468468 OR52N2Q8NGI0 321 aa15.13■□□□□ 0.01
TSPAN4-211ENST00000468468 TIFAQ96CG3 184 aa15.13■□□□□ 0.01
TSPAN4-211ENST00000468468 CCM2Q9BSQ5 444 aa15.13■□□□□ 0.01
TSPAN4-211ENST00000468468 CDADC1Q9BWV3 514 aa15.13■□□□□ 0.01
TSPAN4-211ENST00000468468 ZNF556Q9HAH1 456 aa15.13■□□□□ 0.01
TSPAN4-211ENST00000468468 CPNE5Q9HCH3 593 aa15.13■□□□□ 0.01
TSPAN4-211ENST00000468468 ANKRD34BA5PLL1 514 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 NEDD8-MDP1E9PL57 170 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 NPC1O15118 1278 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 HSMCR30P0CW71 290 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 GABRB1P18505 474 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 PDHA2P29803 388 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 CRISP3P54108 245 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 DCDC1P59894 354 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 PCDH1Q08174 1060 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 ZNF763Q0D2J5 394 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 FBXO43Q4G163 708 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 C10orf62Q5T681 223 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 SLCO4C1Q6ZQN7 724 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 KLHDC8AQ8IYD2 350 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 FAM83FQ8NEG4 500 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 KBTBD8Q8NFY9 601 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 GOT1L1Q8NHS2 421 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 CIDECQ96AQ7 238 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 CXorf40BQ96DE9 158 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 RAD9AQ99638 391 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 CENPOQ9BU64 300 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 SAP18O00422 153 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 ZNF197O14709 1029 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 ATG13O75143 517 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 FGBP02675 491 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 ITGA2P17301 1181 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 S100A5P33763 92 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 TPTEP56180 551 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 HENMT1Q5T8I9 393 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 FBXO46Q6PJ61 603 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 OR5AK3PQ8NH89 298 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 BTN2A2Q8WVV5 523 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 GTPBP3Q969Y2 492 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 FOPNLQ96NB1 174 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 CHCHD6Q9BRQ6 235 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 MS4A12Q9NXJ0 267 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 MAP4K5Q9Y4K4 846 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 INSL6Q9Y581 213 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 PCDHGA3Q9Y5H0 932 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 A3GALT2U3KPV4 340 aa15.12■□□□□ 0.01
TSPAN4-211ENST00000468468 SLC5A10A0PJK1 596 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 QSOX1O00391 747 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 PCDH17O14917 1159 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 MOSPD3O75425 235 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 DLGAP3O95886 979 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 GTF2E2P29084 291 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 RGS6P49758 472 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 NKX2-5P52952 324 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 NTHL1P78549 312 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 RBBP4Q09028 425 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 FCHO2Q0JRZ9 810 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 UTS2BQ765I0 119 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 COMMD6Q7Z4G1 85 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 ZSCAN5AQ9BUG6 496 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 TMEM121BQ9BXQ6 578 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 NXF2Q9GZY0 626 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 LINC00597Q9H2U6 94 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 C1GALT1Q9NS00 363 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 THSD1Q9NS62 852 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 SLC6A14Q9UN76 642 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 UGT2A1Q9Y4X1 527 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 LEFTY1O75610 366 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 TGFB1P01137 390 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 CTNNB1P35222 781 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 CDK6Q00534 326 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 C2orf80Q0P641 193 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 SELENBP1Q13228 472 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 CARTPTQ16568 116 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 ZNF284Q2VY69 593 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 SYTL1Q8IYJ3 562 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 MRPL43Q8N983 215 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 LMNTD1Q8N9Z9 388 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 BADQ92934 168 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 ARMC5Q96C12 935 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 PPCDCQ96CD2 204 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 TRIM39Q9HCM9 518 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 TAS2R16Q9NYV7 291 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 HCFC2Q9Y5Z7 792 aa15.11■□□□□ 0.01
TSPAN4-211ENST00000468468 WASH3PC4AMC7 463 aa15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 MAGP20916 626 aa15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 CHI3L1P36222 383 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 TEKQ02763 1124 aa15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 ARSIQ5FYB1 569 aa15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 IER5LQ5T953 404 aa15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 PNCKQ6P2M8 343 aa15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 TRIM40Q6P9F5 258 aa15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 TMEM220Q6QAJ8 160 aa15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 RNF130Q86XS8 419 aa15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 PARP16Q8N5Y8 322 aa15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 B3GNT7Q8NFL0 401 aa15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 WDR48Q8TAF3 677 aa15.1■□□□□ 0.01
TSPAN4-211ENST00000468468 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms