RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 APH1BQ8WW43 257 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 TRMT61AQ96FX7 289 aaKnown RBP17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 TMEM169Q96HH4 297 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 MRPL39Q9NYK5 338 aaKnown RBP17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 CD84Q9UIB8 345 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 MAPRE3Q9UPY8 281 aa17.34■□□□□ 0.37
SNAPC3-205ENST00000467062 GLYATL1P3A0A0U1RQE8 302 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 MTX2O75431 263 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 PPM1BO75688 479 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 SOD2P04179 222 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 LMAN2Q12907 356 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 PCBP2Q15366 365 aaKnown RBP eCLIP17.33■□□□□ 0.368e-6■■■■□ 24
SNAPC3-205ENST00000467062 KLHL12Q53G59 568 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 PDZK1Q5T2W1 519 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 MLIPQ5VWP3 458 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 GPR149Q86SP6 731 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 ADGRG3Q86Y34 549 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 STK40Q8N2I9 435 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 HJURPQ8NCD3 748 aaPredicted RBP17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 ZBTB44Q8NCP5 570 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 UBE2FQ969M7 185 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 KRT84Q9NSB2 600 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 CFAP97Q9P2B7 532 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 KIF17Q9P2E2 1029 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 DNAH14Q0VDD8 3507 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 MYO7AQ13402 2215 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 UPK3BL1B0FP48 263 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 UPK3BL2E5RIL1 263 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 MYL12BO14950 172 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 PROM1O43490 865 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 MYL12AP19105 171 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 RPP38P78345 283 aaKnown RBP17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 CYP4F3Q08477 520 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 RIPPLY1Q0D2K3 151 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 TMEM81Q6P7N7 255 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 GAREM2Q75VX8 874 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 DGLUCYQ7Z3D6 616 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 ENTHD1Q8IYW4 607 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 PHACTR4Q8IZ21 702 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 CMTM8Q8IZV2 173 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 FBXW5Q969U6 566 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 PYURFQ96I23 114 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 FERD3LQ96RJ6 166 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 SLC6A13Q9NSD5 602 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 VNN3Q9NY84 501 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 MAN2B2Q9Y2E5 1009 aa17.33■□□□□ 0.36
SNAPC3-205ENST00000467062 CLCA1A8K7I4 914 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 PITPNM1O00562 1244 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 CREG1O75629 220 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 OTCP00480 354 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 HSMCR30P0CW71 290 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 RRAS2P62070 204 aaPredicted RBP17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 RUNX1T1Q06455 604 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 GRK1Q15835 563 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 SPANXN4Q5MJ08 99 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 FAM131AQ6UXB0 335 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 CCDC149Q6ZUS6 474 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 SNX20Q7Z614 316 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 CCDC71Q8IV32 467 aaPredicted RBP17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 ZDHHC21Q8IVQ6 265 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 RBFAQ8N0V3 343 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 FAM181AQ8N9Y4 354 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 NLGN4YQ8NFZ3 816 aaPredicted RBP17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 FAM126AQ9BYI3 521 aaPredicted RBP17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 PPIL3Q9H2H8 161 aaKnown RBP17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 SPASTQ9UBP0 616 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 GMEB2Q9UKD1 530 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 ZNF490Q9ULM2 529 aaPredicted RBP17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 CCL27Q9Y4X3 112 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 INSL5Q9Y5Q6 135 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 ITGALP20701 1170 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 ACRV1P26436 265 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 HOXA9P31269 272 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 SLC19A1P41440 591 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 PSPHP78330 225 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 UBE3AQ05086 875 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 GTF2H3Q13889 308 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 CACHD1Q5VU97 1274 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 RNF175Q8N4F7 328 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 ZBTB2Q8N680 514 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 DCAF4L2Q8NA75 395 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 BARD1Q99728 777 aaKnown RBP17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 IL21Q9HBE4 155 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 CMAHPQ9Y471 501 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 PCDHB1Q9Y5F3 818 aa17.32■□□□□ 0.36
SNAPC3-205ENST00000467062 WASHC1A8K0Z3 465 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 SMLR1H3BR10 107 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 SERPINA1P01009 418 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 RORCP51449 518 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 EPHB3P54753 998 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 CDKN3Q16667 212 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 ZXDCQ2QGD7 858 aaPredicted RBP17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 HKDC1Q2TB90 917 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 SAXO2Q658L1 398 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 RETSATQ6NUM9 610 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 SUSD1Q6UWL2 747 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 CERS6Q6ZMG9 384 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 CEP68Q76N32 757 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 ZNF367Q7RTV3 350 aa17.31■□□□□ 0.36
SNAPC3-205ENST00000467062 ANKRD46Q86W74 232 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms