RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 PYGBP11216 843 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 NFKB1P19838 968 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 MAOAP21397 527 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 GJC1P36383 396 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 SLCO1A2P46721 670 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 CCR8P51685 355 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 BTG2P78543 158 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 PCDH1Q08174 1060 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 MPP3Q13368 585 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 PDK2Q15119 407 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 TERF2Q15554 542 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 HADHQ16836 314 aaKnown RBP11.49□□□□□ -0.57
UBR4-210ENST00000466969 SLC22A10Q63ZE4 541 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 SCIMPQ6UWF3 145 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 C22orf34Q6ZV56 151 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 PDSS2Q86YH6 399 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 OR5T3Q8NGG3 340 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 GSDMBQ8TAX9 411 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 PROX1Q92786 737 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 TIGD1Q96MW7 591 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 RBM4Q9BWF3 364 aaKnown RBP11.49□□□□□ -0.57
UBR4-210ENST00000466969 BHLHE41Q9C0J9 482 aaPredicted RBP11.49□□□□□ -0.57
UBR4-210ENST00000466969 ADAP2Q9NPF8 381 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 SPATA7Q9P0W8 599 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 TTC7AQ9ULT0 858 aaPredicted RBP11.49□□□□□ -0.57
UBR4-210ENST00000466969 MAPRE3Q9UPY8 281 aa11.49□□□□□ -0.57
UBR4-210ENST00000466969 EPPK1P58107 5090 aaKnown RBP11.49□□□□□ -0.57
UBR4-210ENST00000466969 KRT87PA6NCN2 255 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 TGFAP01135 160 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 APOA4P06727 396 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 VSIG8P0DPA2 414 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 CCR7P32248 378 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 BDKRB1P46663 353 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 PRDX1Q06830 199 aaKnown RBP11.48□□□□□ -0.57
UBR4-210ENST00000466969 TBL3Q12788 808 aaKnown RBP11.48□□□□□ -0.57
UBR4-210ENST00000466969 PKP1Q13835 747 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 ITIH4Q14624 930 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 CCSMST1Q4G0I0 132 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 PRAMEF20Q5VT98 475 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 ICE2Q659A1 982 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 ADAM5Q6NVV9 412 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 MAGEC3Q8TD91 643 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 SKA2Q8WVK7 121 aaPredicted RBP11.48□□□□□ -0.57
UBR4-210ENST00000466969 SREK1Q8WXA9 508 aaKnown RBP11.48□□□□□ -0.57
UBR4-210ENST00000466969 FAM168AQ92567 244 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 WNT2BQ93097 391 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 EBNA1BP2Q99848 306 aaKnown RBP11.48□□□□□ -0.57
UBR4-210ENST00000466969 MACROD1Q9BQ69 325 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 UGT2B28Q9BY64 529 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 PRDM9Q9NQV7 894 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 TAC3Q9UHF0 121 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 SLC6A5Q9Y345 797 aa11.48□□□□□ -0.57
UBR4-210ENST00000466969 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 A0A1W2PNV4 684 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 LRRC3CA6NJW4 275 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 TNFSF13O75888 250 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 C1orf105O95561 183 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 CD68P34810 354 aaPredicted RBP11.47□□□□□ -0.57
UBR4-210ENST00000466969 ZNF140P52738 457 aaPredicted RBP11.47□□□□□ -0.57
UBR4-210ENST00000466969 PHKG1Q16816 387 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 ZNF474Q6S9Z5 364 aaPredicted RBP11.47□□□□□ -0.57
UBR4-210ENST00000466969 CAMKVQ8NCB2 501 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 NUP43Q8NFH3 380 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 ZNF418Q8TF45 676 aaPredicted RBP11.47□□□□□ -0.57
UBR4-210ENST00000466969 SMPDL3AQ92484 453 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 ABTB1Q969K4 478 aaPredicted RBP11.47□□□□□ -0.57
UBR4-210ENST00000466969 MRPL24Q96A35 216 aaKnown RBP11.47□□□□□ -0.57
UBR4-210ENST00000466969 OXNAD1Q96HP4 312 aaPredicted RBP11.47□□□□□ -0.57
UBR4-210ENST00000466969 CCDC138Q96M89 665 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 ADAD1Q96M93 576 aaKnown RBP11.47□□□□□ -0.57
UBR4-210ENST00000466969 C19orf43Q9BQ61 176 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 NTMT1Q9BV86 223 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 TSSK1BQ9BXA7 367 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 KLHL4Q9C0H6 718 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 PNO1Q9NRX1 252 aaKnown RBP11.47□□□□□ -0.57
UBR4-210ENST00000466969 PPIEQ9UNP9 301 aaKnown RBP11.47□□□□□ -0.57
UBR4-210ENST00000466969 MED12LQ86YW9 2145 aa11.47□□□□□ -0.57
UBR4-210ENST00000466969 IGKV3D-11A0A0A0MRZ8 115 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 GOLGA6L4A6NEF3 574 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 CHST10O43529 356 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 AVILO75366 819 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 GPC4O75487 556 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 FTCDO95954 541 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 AGTP01019 485 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 THBDP07204 575 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 PPP3CBP16298 524 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 KLK7P49862 253 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 GPR143P51810 404 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 HK2P52789 917 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 SKP1P63208 163 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 NHSL2Q5HYW2 709 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 PACS1Q6VY07 963 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 HSDL2Q6YN16 418 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 VN1R4Q7Z5H5 301 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 PEG10Q86TG7 708 aaKnown RBP11.46□□□□□ -0.57
UBR4-210ENST00000466969 PIANPQ8IYJ0 282 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 CNEP1R1Q8N9A8 125 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 KCT2Q8NC54 265 aa11.46□□□□□ -0.57
UBR4-210ENST00000466969 GABPB2Q8TAK5 448 aaPredicted RBP11.46□□□□□ -0.57
UBR4-210ENST00000466969 PGM2Q96G03 612 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms