RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 TAPBPO15533 448 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 B3GALT2O43825 422 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 CLEC3AO75596 197 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 CLDN14O95500 239 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 PPP2R1BP30154 601 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 SSTR1P30872 391 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 HNRNPFP52597 415 aaKnown RBP17.87■□□□□ 0.45
COL9A3-206ENST00000466532 PLA2G16P53816 162 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 HSD17B7P56937 341 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 POU4F1Q01851 419 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 ILF2Q12905 390 aaKnown RBP17.87■□□□□ 0.45
COL9A3-206ENST00000466532 SLC13A2Q13183 592 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 CDSNQ15517 529 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 NCCRP1Q6ZVX7 275 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-206ENST00000466532 SULF2Q8IWU5 870 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 CHERPQ8IWX8 916 aaKnown RBP17.87■□□□□ 0.45
COL9A3-206ENST00000466532 CYP4Z2PQ8N1L4 340 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 TCAIMQ8N3R3 496 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 TMEM156Q8N614 296 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 FAM47BQ8NA70 645 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 POGLUT1Q8NBL1 392 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 TMEM52Q8NDY8 209 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 PYROXD1Q8WU10 500 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 TSPAN17Q96FV3 270 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 VMP1Q96GC9 406 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 SEC16BQ96JE7 1060 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 QRFPRQ96P65 431 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 PHF12Q96QT6 1004 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 CNOT10Q9H9A5 744 aaKnown RBP17.87■□□□□ 0.45
COL9A3-206ENST00000466532 DNAJC11Q9NVH1 559 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 MRPS33Q9Y291 106 aaKnown RBP17.87■□□□□ 0.45
COL9A3-206ENST00000466532 PHF3Q92576 2039 aaKnown RBP17.87■□□□□ 0.45
COL9A3-206ENST00000466532 KLRC4-KLRK1H3BQV0 150 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 TGFBR3LH3BV60 316 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 PRRG2O14669 202 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 TFECO14948 347 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-206ENST00000466532 PHGDHO43175 533 aaKnown RBP17.86■□□□□ 0.45
COL9A3-206ENST00000466532 ITGA10O75578 1167 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 WISP3O95389 354 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-206ENST00000466532 CCDC166P0CW27 439 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 ELAVL4P26378 380 aaKnown RBP17.86■□□□□ 0.45
COL9A3-206ENST00000466532 HPDP32754 393 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-206ENST00000466532 PTGER1P34995 402 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 RFC3P40938 356 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 CBLBQ13191 982 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 FBXO48Q5FWF7 155 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 TRIM40Q6P9F5 258 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 DOLPP1Q86YN1 238 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 GPSM1Q86YR5 675 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 SNX31Q8N9S9 440 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 BBOF1Q8ND07 529 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 OR2L5Q8NG80 312 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 CDKL2Q92772 493 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 NCLNQ969V3 563 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 MTFMTQ96DP5 389 aaKnown RBP17.86■□□□□ 0.45
COL9A3-206ENST00000466532 CCDC77Q9BR77 488 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 PITHD1Q9GZP4 211 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-206ENST00000466532 REXO4Q9GZR2 422 aaKnown RBP17.86■□□□□ 0.45
COL9A3-206ENST00000466532 TXNDC16Q9P2K2 825 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 ZNF223Q9UK11 482 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-206ENST00000466532 PPIEQ9UNP9 301 aaKnown RBP17.86■□□□□ 0.45
COL9A3-206ENST00000466532 ASB1Q9Y576 335 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 CLDN16Q9Y5I7 305 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 HCFC1P51610 2035 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 ZNF407Q9C0G0 2248 aa17.86■□□□□ 0.45
COL9A3-206ENST00000466532 CXorf49A8MYA2 514 aaPredicted RBP17.85■□□□□ 0.45
COL9A3-206ENST00000466532 C19orf84I3L1E1 186 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 TBX6O95947 436 aaPredicted RBP17.85■□□□□ 0.45
COL9A3-206ENST00000466532 CERS1P27544 350 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 GGT5P36269 586 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 HSPA7P48741 367 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 MRPS25P82663 173 aaKnown RBP17.85■□□□□ 0.45
COL9A3-206ENST00000466532 ADPRMQ3LIE5 342 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 XKR6Q5GH73 641 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 ADNP2Q6IQ32 1131 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 C3P1Q6ZMU1 363 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 VN1R5Q7Z5H4 357 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 FGD2Q7Z6J4 655 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 CLNKQ7Z7G1 428 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 ZNF595Q8IYB9 648 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 PHF10Q8WUB8 498 aaKnown RBP17.85■□□□□ 0.45
COL9A3-206ENST00000466532 ESAMQ96AP7 390 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 SERINC2Q96SA4 455 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 RBBP8Q99708 897 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 EHD1Q9H4M9 534 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 COPS7BQ9H9Q2 264 aaPredicted RBP17.85■□□□□ 0.45
COL9A3-206ENST00000466532 SAYSD1Q9NPB0 183 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 ADAP2Q9NPF8 381 aa17.85■□□□□ 0.45
COL9A3-206ENST00000466532 DNAJC13O75165 2243 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 E9PLN8 166 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 PEX1O43933 1283 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 PRAMEF4O60810 478 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 STK16O75716 305 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 ZFAND5O76080 213 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 CD1DP15813 335 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 STMN1P16949 149 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 TFEBP19484 476 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 SSR4P51571 173 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 GPR143P51810 404 aa17.84■□□□□ 0.45
COL9A3-206ENST00000466532 MTTPP55157 894 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms