RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SDC1P18827 310 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 TACR1P25103 407 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 ARFIP2P53365 341 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 GABREP78334 506 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 BTN3A2P78410 334 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 SF3A3Q12874 501 aaKnown RBP eCLIP10.55□□□□□ -0.724e-6■■■■□ 22.2
VCP-204ENST00000466100 RUNX2Q13950 521 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 TMEM198Q66K66 360 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 NIPAL1Q6NVV3 410 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 PRMT9Q6P2P2 845 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 ZNF517Q6ZMY9 492 aaPredicted RBP10.55□□□□□ -0.72
VCP-204ENST00000466100 ACAD11Q709F0 780 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 COX15Q7KZN9 410 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 PAGE2Q7Z2X7 111 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 CLNKQ7Z7G1 428 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 CPLX4Q7Z7G2 160 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 METTL27Q8N6F8 245 aaPredicted RBP10.55□□□□□ -0.72
VCP-204ENST00000466100 FNDC5Q8NAU1 212 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 CEP70Q8NHQ1 597 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 RNF31Q96EP0 1072 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 LRFN5Q96NI6 719 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 SERINC2Q96SA4 455 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 C1orf50Q9BV19 199 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 EBPLQ9BY08 206 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 ASPSCR1Q9BZE9 553 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 BRINP2Q9C0B6 783 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 ROGDIQ9GZN7 287 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 ANKHQ9HCJ1 492 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 SLC22A11Q9NSA0 550 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 KCMF1Q9P0J7 381 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 KLK13Q9UKR3 277 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 POLR3HQ9Y535 204 aaPredicted RBP10.55□□□□□ -0.72
VCP-204ENST00000466100 ASB4Q9Y574 426 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 ANKRD11Q6UB99 2663 aaPredicted RBP10.55□□□□□ -0.72
VCP-204ENST00000466100 ZZEF1O43149 2961 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 A0A088AWK7 358 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 E9PBE3 544 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 SGK494L7N484 410 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 LOC400499M0QZD8 3231 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 ANKRD28O15084 1053 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 NVLO15381 856 aaKnown RBP10.54□□□□□ -0.72
VCP-204ENST00000466100 KLHL41O60662 606 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 TNFSF15O95150 251 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 ZNF10P21506 573 aaPredicted RBP10.54□□□□□ -0.72
VCP-204ENST00000466100 ID4P47928 161 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 MRPL19P49406 292 aaKnown RBP10.54□□□□□ -0.72
VCP-204ENST00000466100 DIO3P55073 304 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 HNRNPH2P55795 449 aaKnown RBP10.54□□□□□ -0.72
VCP-204ENST00000466100 OLR1P78380 273 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 ZNF763Q0D2J5 394 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 DSG2Q14126 1118 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 RTP5Q14D33 572 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 C1orf189Q5VU69 101 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 IL23RQ5VWK5 629 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 FOXR1Q6PIV2 292 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 MED25Q71SY5 747 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 SPATA19Q7Z5L4 167 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 DSELQ8IZU8 1212 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 CA13Q8N1Q1 262 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 OR5T3Q8NGG3 340 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.54□□□□□ -0.72
VCP-204ENST00000466100 SLC46A1Q96NT5 459 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 MAPKAP1Q9BPZ7 522 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 NPLQ9BXD5 320 aaPredicted RBP10.54□□□□□ -0.72
VCP-204ENST00000466100 ULBP3Q9BZM4 244 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 NRSN2Q9GZP1 204 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 ACTL8Q9H568 366 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 COPS7BQ9H9Q2 264 aaPredicted RBP10.54□□□□□ -0.72
VCP-204ENST00000466100 CLK4Q9HAZ1 481 aaKnown RBP10.54□□□□□ -0.72
VCP-204ENST00000466100 LYRM4Q9HD34 91 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 PRM3Q9NNZ6 103 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 MYNNQ9NPC7 610 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 TXLNGQ9NUQ3 528 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 AIG1Q9NVV5 245 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 NOP53Q9NZM5 478 aaKnown RBP10.54□□□□□ -0.72
VCP-204ENST00000466100 ACSL6Q9UKU0 697 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 DAPP1Q9UN19 280 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 PCDHGA7Q9Y5G6 932 aa10.54□□□□□ -0.72
VCP-204ENST00000466100 ACACAQ13085 2346 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 NUP214P35658 2090 aaPredicted RBP10.53□□□□□ -0.72
VCP-204ENST00000466100 IGLV3-12A0A075B6K2 115 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 TEX51A0A1B0GUA7 166 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 MEN1O00255 615 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 B3GALT2O43825 422 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 STK17BO94768 372 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 ANXA4P09525 319 aaPredicted RBP10.53□□□□□ -0.72
VCP-204ENST00000466100 FAM58BPP0C7Q3 252 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 PRPS2P11908 318 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 MAPK1P28482 360 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 OR1D4P47884 311 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 AVPR1BP47901 424 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 LIM2P55344 173 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 C21orf58P58505 322 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 TRA2BP62995 288 aaKnown RBP10.53□□□□□ -0.72
VCP-204ENST00000466100 SKP1P63208 163 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 MAT1AQ00266 395 aaKnown RBP10.53□□□□□ -0.72
VCP-204ENST00000466100 FOXC1Q12948 553 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 MAD2L1Q13257 205 aaPredicted RBP10.53□□□□□ -0.72
VCP-204ENST00000466100 SLAMF1Q13291 335 aa10.53□□□□□ -0.72
VCP-204ENST00000466100 PTGR1Q14914 329 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms