RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 KCND3Q9UK17 655 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 MAPRE3Q9UPY8 281 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 TMEM98Q9Y2Y6 226 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 PLEKHM1Q9Y4G2 1056 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 MAP4K5Q9Y4K4 846 aa13.21□□□□□ -0.29
HDAC6-215ENST00000465457 CFLARO15519 480 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 SORBS2O94875 1100 aaKnown RBP13.2□□□□□ -0.3
HDAC6-215ENST00000465457 STAMBPO95630 424 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 PRF1P14222 555 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 SLC2A4P14672 509 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 CLNS1AP54105 237 aaKnown RBP13.2□□□□□ -0.3
HDAC6-215ENST00000465457 TBPL1P62380 186 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 RPL38P63173 70 aaKnown RBP13.2□□□□□ -0.3
HDAC6-215ENST00000465457 CLPPQ16740 277 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-215ENST00000465457 HIST2H2ACQ16777 129 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-215ENST00000465457 ZXDCQ2QGD7 858 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-215ENST00000465457 IL23RQ5VWK5 629 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 HIST2H2AA3Q6FI13 130 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 C8orf82Q6P1X6 216 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-215ENST00000465457 SCIMPQ6UWF3 145 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 LILRA3Q8N6C8 439 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-215ENST00000465457 OR9I1Q8NGQ6 314 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 OR5K2Q8NHB8 316 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 ZNF480Q8WV37 535 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 WDR60Q8WVS4 1066 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 TFGQ92734 400 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-215ENST00000465457 PYCR2Q96C36 320 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 SCARF2Q96GP6 870 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-215ENST00000465457 CLPTM1LQ96KA5 538 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 CDRT15Q96T59 188 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 C1orf50Q9BV19 199 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 ACPTQ9BZG2 426 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 GIMAP2Q9UG22 337 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 POMPQ9Y244 141 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 ASF1AQ9Y294 204 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 TMEM184BQ9Y519 407 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-215ENST00000465457 AKAP9Q99996 3911 aa13.2□□□□□ -0.3
HDAC6-215ENST00000465457 TNFRSF10CO14798 259 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 PRMT3O60678 531 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 DNAJA2O60884 412 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 SEC22BO75396 215 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 PDE5AO76074 875 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 LDLRP01130 860 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 PDYNP01213 254 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 IL6P05231 212 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 CEACAM5P06731 702 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 ERGP11308 486 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 GRNP28799 593 aaKnown RBP13.19□□□□□ -0.3
HDAC6-215ENST00000465457 SERPINB1P30740 379 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 GCKP35557 465 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 DLSTP36957 453 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 GPR3P46089 330 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 PHEXP78562 749 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 MC2RQ01718 297 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 TRAP1Q12931 704 aaKnown RBP13.19□□□□□ -0.3
HDAC6-215ENST00000465457 PLA2G4EQ3MJ16 856 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 CRTC2Q53ET0 693 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-215ENST00000465457 CPZQ66K79 652 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 ATG9BQ674R7 924 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 ZFP1Q6P2D0 407 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 TMEM71Q6P5X7 295 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 LCTLQ6UWM7 567 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 TBC1D21Q8IYX1 336 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 DPP10Q8N608 796 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 PROKR1Q8TCW9 393 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 ASB9Q96DX5 294 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 PITHD1Q9GZP4 211 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-215ENST00000465457 MUC13Q9H3R2 512 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 INTS7Q9NVH2 962 aaKnown RBP13.19□□□□□ -0.3
HDAC6-215ENST00000465457 ADA2Q9NZK5 511 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 ZNHIT2Q9UHR6 403 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 ADGRE2Q9UHX3 823 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 AP3M1Q9Y2T2 418 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 TSC22D4Q9Y3Q8 395 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 POLR3HQ9Y535 204 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-215ENST00000465457 HIVEP1P15822 2718 aa13.19□□□□□ -0.3
HDAC6-215ENST00000465457 TRBV23OR9-2A0A075B6M9 112 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 CDC14CA4D256 554 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 E7EQ34 232 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 MYO1DO94832 1006 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 EML2O95834 649 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 G6PDP11413 515 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 CAPN3P20807 821 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 IDSP22304 550 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 VARSP26640 1264 aaKnown RBP13.18□□□□□ -0.3
HDAC6-215ENST00000465457 MC1RQ01726 317 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 SLC34A1Q06495 639 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 ILF3Q12906 894 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC6-215ENST00000465457 CHAF1BQ13112 559 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 BIRC2Q13490 618 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 DOC2AQ14183 400 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 RCN1Q15293 331 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 DPY19L1Q2PZI1 675 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 VPS26BQ4G0F5 336 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 RFTN2Q52LD8 501 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-215ENST00000465457 SGO1Q5FBB7 561 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 MED27Q6P2C8 311 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 SLCO4C1Q6ZQN7 724 aa13.18□□□□□ -0.3
HDAC6-215ENST00000465457 FAM83HQ6ZRV2 1179 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-215ENST00000465457 MSANTD1Q6ZTZ1 278 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms