RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SCARB2Q14108 478 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 TRIM71Q2Q1W2 868 aaKnown RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 CRB2Q5IJ48 1285 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 PDZK1Q5T2W1 519 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 MFSD4BQ5TF39 518 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 LCN1P1Q5VSP4 162 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 SAXO2Q658L1 398 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ZNF770Q6IQ21 691 aaPredicted RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 KLHL17Q6TDP4 642 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 GLB1LQ6UWU2 654 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 LINGO4Q6UY18 593 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 CREB3L2Q70SY1 520 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ZNF280BQ86YH2 543 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 DENND1CQ8IV53 801 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 CCDC28AQ8IWP9 274 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 SLC30A8Q8IWU4 369 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ADGRG2Q8IZP9 1017 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 OXR1Q8N573 874 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 NANOGP1Q8N7R0 232 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 AQP11Q8NBQ7 271 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 OR52N2Q8NGI0 321 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 OR4A15Q8NGL6 344 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 VANGL1Q8TAA9 524 aaPredicted RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 WDR20Q8TBZ3 569 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ENKURQ8TC29 256 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 CREB3L4Q8TEY5 395 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ASB11Q8WXH4 323 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 TRMT61AQ96FX7 289 aaKnown RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 VPS35Q96QK1 796 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 COPS8Q99627 209 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 DHRS9Q9BPW9 319 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 TCF25Q9BQ70 676 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 GTPBP2Q9BX10 602 aaKnown RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 BHLHE41Q9C0J9 482 aaPredicted RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 BRF2Q9HAW0 419 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ABCB9Q9NP78 766 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ZDHHC3Q9NYG2 299 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ATP6V1HQ9UI12 483 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 KCND3Q9UK17 655 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 OGDHLQ9ULD0 1010 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 RPL36Q9Y3U8 105 aaKnown RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 SCN10AQ9Y5Y9 1956 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 A0A0X1KG70 313 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 FABP12A6NFH5 140 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 OR6C70A6NIJ9 312 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 SLC38A8A6NNN8 435 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 GABRR3A8MPY1 467 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 FADS2P1A8MWK0 482 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 GFYI3L273 518 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 PCDH17O14917 1159 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 PLA2G10O15496 165 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 TMCC2O75069 709 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 GADD45GO95257 159 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 OPN1SWP03999 348 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 RHCEP18577 417 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 TNFRSF1BP20333 461 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ALAS2P22557 587 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 PTBP1P26599 531 aaKnown RBP eCLIP6.99□□□□□ -1.29
USP48-206ENST00000464577 CCR7P32248 378 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 KIR2DL3P43628 341 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 MAP2K3P46734 347 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 RAE1P78406 368 aaKnown RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 CD83Q01151 205 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 IRF8Q02556 426 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 GPR17Q13304 367 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 C1DQ13901 141 aaKnown RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 GPR19Q15760 415 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 ZNF630Q2M218 657 aaPredicted RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 WDR45BQ5MNZ6 344 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 DDI2Q5TDH0 399 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 C12orf73Q69YU5 71 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 TPGS1Q6ZTW0 290 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 SLC34A3Q8N130 599 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 YIPF7Q8N8F6 280 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 C2orf15Q8WU43 125 aaKnown RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 OVCA2Q8WZ82 227 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 AP3S1Q92572 193 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 GTPBP3Q969Y2 492 aaKnown RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 FAM193BQ96PV7 902 aaPredicted RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 SEPT5Q99719 369 aaPredicted RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 NMNAT1Q9HAN9 279 aaPredicted RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 TRIM39Q9HCM9 518 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 PLEKHB1Q9UF11 243 aaPredicted RBP6.99□□□□□ -1.29
USP48-206ENST00000464577 SLC22A14Q9Y267 594 aa6.99□□□□□ -1.29
USP48-206ENST00000464577 IGLV3-16A0A075B6K0 115 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 MYADML2A6NDP7 307 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 H0YIV9 168 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 SHOXO15266 292 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 SMAD6O43541 496 aaKnown RBP6.98□□□□□ -1.29
USP48-206ENST00000464577 CPNE3O75131 537 aaKnown RBP6.98□□□□□ -1.29
USP48-206ENST00000464577 SOCS5O75159 536 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 CDRT1O95170 752 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 VNN2O95498 520 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 KLKB1P03952 638 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 HBQ1P09105 142 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 TSPAN19P0C672 248 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 CCNYL3P0C7X3 344 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 OSMP13725 252 aa6.98□□□□□ -1.29
USP48-206ENST00000464577 ETFAP13804 333 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms