RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 DCTN3O75935 186 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 CD46P15529 392 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 TCEA1P23193 301 aaKnown RBP8.84□□□□□ -0.99
DDX39B-215ENST00000462256 ME2P23368 584 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 ACADVLP49748 655 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 PGGT1BP53609 377 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 HMGCS1Q01581 520 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 CSTF3Q12996 717 aaKnown RBP8.84□□□□□ -0.99
DDX39B-215ENST00000462256 STX5Q13190 355 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 ST3GAL2Q16842 350 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 WDR74Q6RFH5 385 aaPredicted RBP8.84□□□□□ -0.99
DDX39B-215ENST00000462256 RNF111Q6ZNA4 994 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 FKBP9P1Q75LS8 142 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 CEP97Q8IW35 865 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 CARFQ8N187 725 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 MIER2Q8N344 545 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 OR4K17Q8NGC6 315 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 NEIL2Q969S2 332 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 GAL3ST3Q96A11 431 aa8.84□□□□□ -0.99
DDX39B-215ENST00000462256 GATA5Q9BWX5 397 aaPredicted RBP8.84□□□□□ -0.99
DDX39B-215ENST00000462256 PRAMEF33A0A0G2JMD5 474 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 CDC40O60508 579 aaKnown RBP eCLIP8.83□□□□□ -1
DDX39B-215ENST00000462256 KRT75O95678 551 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 GBAP04062 536 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 IVDP26440 423 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 GUCA1AP43080 201 aaPredicted RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 HSPB3Q12988 150 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 KRT72Q14CN4 511 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 GPAT3Q53EU6 434 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 ARL13AQ5H913 290 aaPredicted RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 GPR155Q7Z3F1 870 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 NRROSQ86YC3 692 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 APLFQ8IW19 511 aaPredicted RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 PELI3Q8N2H9 469 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 GPR151Q8TDV0 419 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 APOBEC4Q8WW27 367 aaKnown RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 FCRL4Q96PJ5 515 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 MACROD1Q9BQ69 325 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 DPH2Q9BQC3 489 aaPredicted RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 DHRS4Q9BTZ2 278 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 SCHIP1Q9P0W5 487 aaPredicted RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 PRODH2Q9UF12 536 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 UTS2RQ9UKP6 389 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 POLR3HQ9Y535 204 aaPredicted RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 TRIM64CA6NLI5 447 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 RTCAO00442 366 aaKnown RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 HDAC3O15379 428 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 BIRC5O15392 142 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 NOBOXO60393 691 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 SERPINA6P08185 405 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 ZNF888P0CJ79 500 aaPredicted RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 PRPS2P11908 318 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 ACP1P24666 158 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 AHRP35869 848 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 KIR3DL1P43629 444 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 XKP51811 444 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 LIMK1P53667 647 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 AQP5P55064 265 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 ACVR1Q04771 509 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 PWP1Q13610 501 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 RALGAPA2Q2PPJ7 1873 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 MAML2Q8IZL2 1156 aaPredicted RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 DCAKDQ8WVC6 231 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 SDCCAG3Q96C92 435 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 TRAPPC9Q96Q05 1148 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 SPRTNQ9H040 489 aaPredicted RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 SUCOQ9UBS9 1254 aaKnown RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 ATP6V1HQ9UI12 483 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 CNOT6Q9ULM6 557 aaKnown RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 ICKQ9UPZ9 632 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 COL6A6A6NMZ7 2263 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 THADAQ6YHU6 1953 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 LOC100653049A0A140TA62 436 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 PDPK1O15530 556 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 CLEC3AO75596 197 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 KRT34O76011 436 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 IFNA14P01570 189 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 TFPIP10646 304 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 IMPA1P29218 277 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 FEN1P39748 380 aaKnown RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 NCBP2P52298 156 aaKnown RBP eCLIP8.83□□□□□ -1
DDX39B-215ENST00000462256 GBX1Q14549 363 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 CLEC6AQ6EIG7 209 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 ENDOVQ8N8Q3 282 aaKnown RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 COX18Q8N8Q8 333 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 OR51Q1Q8NH59 317 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 TWIST2Q8WVJ9 160 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 SMPDL3BQ92485 455 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 RHBDF1Q96CC6 855 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 PANX1Q96RD7 426 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 PITHD1Q9GZP4 211 aaPredicted RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 Q9N2J8 555 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 GMEB1Q9Y692 573 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 IGHV5-10-1A0A0J9YXX1 117 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 CHST10O43529 356 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 BPGMP07738 259 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 HOXB3P14651 431 aaPredicted RBP8.83□□□□□ -1
DDX39B-215ENST00000462256 PCSK2P16519 638 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 BNIP1Q12981 228 aa8.83□□□□□ -1
DDX39B-215ENST00000462256 NFYCQ13952 458 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms