RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 RGMAQ96B86 450 aa13.22□□□□□ -0.29
HDLBP-229ENST00000460826 KCNC2Q96PR1 638 aa13.22□□□□□ -0.29
HDLBP-229ENST00000460826 SERPINI1Q99574 410 aa13.22□□□□□ -0.29
HDLBP-229ENST00000460826 TBCDQ9BTW9 1192 aa13.22□□□□□ -0.29
HDLBP-229ENST00000460826 MRPL1Q9BYD6 325 aaKnown RBP13.22□□□□□ -0.29
HDLBP-229ENST00000460826 TGIF2Q9GZN2 237 aa13.22□□□□□ -0.29
HDLBP-229ENST00000460826 PRORYQ9H606 182 aa13.22□□□□□ -0.29
HDLBP-229ENST00000460826 COPS7BQ9H9Q2 264 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-229ENST00000460826 C14orf105Q9NVL8 296 aa13.22□□□□□ -0.29
HDLBP-229ENST00000460826 NXT1Q9UKK6 140 aaKnown RBP13.22□□□□□ -0.29
HDLBP-229ENST00000460826 HMGB1P1B2RPK0 211 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-229ENST00000460826 FAM227AF5H4B4 570 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 AZIN1O14977 448 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 B3GALT2O43825 422 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 ULK1O75385 1050 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 SCELO95171 688 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 SERPINE1P05121 402 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 CD63P08962 238 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 HIST1H1TP22492 207 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-229ENST00000460826 OTX2P32243 289 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 SSR2P43308 183 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 RAP1GDS1P52306 607 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 MTTPP55157 894 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 SKP1P63208 163 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 MC1RQ01726 317 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 TGM3Q08188 693 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 UGT8Q16880 541 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 AP5B1Q2VPB7 878 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 C10orf62Q5T681 223 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-229ENST00000460826 OR4C11Q6IEV9 310 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 NIPAL1Q6NVV3 410 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 PPP1R32Q7Z5V6 425 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 ACOT4Q8N9L9 421 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 ZSCAN1Q8NBB4 408 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 SRFBP1Q8NEF9 429 aaKnown RBP13.21□□□□□ -0.29
HDLBP-229ENST00000460826 PPP1R14CQ8TAE6 165 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 SNRNP27Q8WVK2 155 aaKnown RBP13.21□□□□□ -0.29
HDLBP-229ENST00000460826 SREK1Q8WXA9 508 aaKnown RBP13.21□□□□□ -0.29
HDLBP-229ENST00000460826 SERINC2Q96SA4 455 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 CSF3RQ99062 836 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 MAPKAP1Q9BPZ7 522 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 CRB3Q9BUF7 120 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 ACPTQ9BZG2 426 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 C20orf27Q9GZN8 174 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 BRF2Q9HAW0 419 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 LANCL2Q9NS86 450 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 NKIRAS1Q9NYS0 192 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 C3orf18Q9UK00 162 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 SLC12A4Q9UP95 1085 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 FIS1Q9Y3D6 152 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 PTGDR2Q9Y5Y4 395 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 CROCCQ5TZA2 2017 aa13.21□□□□□ -0.29
HDLBP-229ENST00000460826 ATRXP46100 2492 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 ATMQ13315 3056 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 IGSF10Q6WRI0 2623 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 A0A088AWK7 358 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 IDSB3KWA1 339 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 H3BQF6 201 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 CRCPO75575 148 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 CDC123O75794 336 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-229ENST00000460826 SEMA3DO95025 777 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 RECKO95980 971 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 FHP07954 510 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 UROSP10746 265 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 RNH1P13489 461 aaKnown RBP13.2□□□□□ -0.3
HDLBP-229ENST00000460826 ZNF10P21506 573 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-229ENST00000460826 SERPINB5P36952 375 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 HNRNPFP52597 415 aaKnown RBP13.2□□□□□ -0.3
HDLBP-229ENST00000460826 LIM2P55344 173 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 RAB38P57729 211 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 HMGCS1Q01581 520 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 GALNT1Q10472 559 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-229ENST00000460826 TBL3Q12788 808 aaKnown RBP13.2□□□□□ -0.3
HDLBP-229ENST00000460826 CSTF3Q12996 717 aaKnown RBP13.2□□□□□ -0.3
HDLBP-229ENST00000460826 SSPNQ14714 243 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 CRTC2Q53ET0 693 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-229ENST00000460826 KANK2Q63ZY3 851 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 FAAH2Q6GMR7 532 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 METTL4Q8N3J2 472 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 TMEM52Q8NDY8 209 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 AGR3Q8TD06 166 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 TBC1D20Q96BZ9 403 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 SORT1Q99523 831 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 CENPKQ9BS16 269 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 NPLQ9BXD5 320 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-229ENST00000460826 ROGDIQ9GZN7 287 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 VN1R1Q9GZP7 353 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 TUBB1Q9H4B7 451 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 CLK4Q9HAZ1 481 aaKnown RBP13.2□□□□□ -0.3
HDLBP-229ENST00000460826 KCMF1Q9P0J7 381 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 ZDHHC2Q9UIJ5 367 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 MKL2Q9ULH7 1088 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 DAPP1Q9UN19 280 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 HS3ST3B1Q9Y662 390 aa13.2□□□□□ -0.3
HDLBP-229ENST00000460826 A0A0A6YYD5 115 aa13.19□□□□□ -0.3
HDLBP-229ENST00000460826 SERTM1A2A2V5 107 aa13.19□□□□□ -0.3
HDLBP-229ENST00000460826 TMEM114B3SHH9 223 aa13.19□□□□□ -0.3
HDLBP-229ENST00000460826 MASP2O00187 686 aa13.19□□□□□ -0.3
HDLBP-229ENST00000460826 SOCS6O14544 535 aa13.19□□□□□ -0.3
HDLBP-229ENST00000460826 TMPRSS11DO60235 418 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms