RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 MAML2Q8IZL2 1156 aaPredicted RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 FBXW8Q8N3Y1 598 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZCCHC7Q8N3Z6 543 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ACOT4Q8N9L9 421 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ANKRD53Q8N9V6 530 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 RBM15BQ8NDT2 890 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZNF740Q8NDX6 193 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR4K14Q8NGD5 310 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR4D9Q8NGE8 314 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR8J2Q8NGG1 315 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 CLHC1Q8NHS4 586 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZCCHC10Q8TBK6 192 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 DNAJB14Q8TBM8 379 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 IFI44Q8TCB0 444 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC26A7Q8TE54 656 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 C16orf78Q8WTQ4 265 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 JADE3Q92613 823 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 TANKQ92844 425 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 COL26A1Q96A83 441 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 VPS33AQ96AX1 596 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 MOAP1Q96BY2 351 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 MS4A6EQ96DS6 147 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 CLIP3Q96DZ5 547 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 MMABQ96EY8 250 aaPredicted RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 RBM18Q96H35 190 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 RSRC1Q96IZ7 334 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 VPS50Q96JG6 964 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 TRAPPC9Q96Q05 1148 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 CMKLR1Q99788 373 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 KCTD14Q9BQ13 255 aaPredicted RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 MENTQ9BUN1 341 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ASPSCR1Q9BZE9 553 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 KLHL25Q9H0H3 589 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 LRRN3Q9H3W5 708 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 CLMPQ9H6B4 373 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 DDX31Q9H8H2 851 aaKnown RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 CAPN10Q9HC96 672 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 NEUROD4Q9HD90 331 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 PRDM9Q9NQV7 894 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 TAS2R9Q9NYW1 312 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 EHD3Q9NZN3 535 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 GIMAP2Q9UG22 337 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 GPN3Q9UHW5 284 aaPredicted RBP5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 UTS2RQ9UKP6 389 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 RARRES3Q9UL19 164 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 KLHL20Q9Y2M5 609 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 PCDHGB3Q9Y5G1 929 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 SNX8Q9Y5X2 465 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 ST14Q9Y5Y6 855 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 R4GN57 208 aa5.56□□□□□ -1.52
RNU1-88P-201ENST00000459274 A0A096LPI6 279 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 FAM86C2PA6NEL3 165 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 DUXAA6NLW8 204 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 GABRR3A8MPY1 467 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 TRIM38O00635 465 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR10H2O60403 315 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 FKBP6O75344 327 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLITRK5O94991 958 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 GBAP04062 536 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 IL3P08700 152 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 PVRP15151 417 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 ST6GAL1P15907 406 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 TNNI3P19429 210 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 TCN1P20061 433 aaPredicted RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 ATP5A1P25705 553 aaKnown RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 EEFSECP57772 596 aaKnown RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 PLIN5Q00G26 463 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 TRAP1Q12931 704 aaKnown RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC13A2Q13183 592 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 ILKQ13418 452 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 FAM53BQ14153 422 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 CAPRIN1Q14444 709 aaKnown RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 KIAA0040Q15053 153 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZNHIT3Q15649 155 aaPredicted RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZXDCQ2QGD7 858 aaPredicted RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 SPANXN4Q5MJ08 99 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 ATAD3BQ5T9A4 648 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 INTS11Q5TA45 600 aaKnown RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 NDUFAF5Q5TEU4 345 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 NKAIN2Q5VXU1 208 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 FCRL6Q6DN72 434 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR4F3Q6IEY1 312 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR52E8Q6IFG1 317 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 FBXO42Q6P3S6 717 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 ABHD17CQ6PCB6 329 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 RNF44Q7L0R7 432 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 PRSS42Q7Z5A4 293 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 C17orf82Q86X59 251 aaPredicted RBP5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 DHFR2Q86XF0 187 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 PPP1R3BQ86XI6 285 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 TREML1Q86YW5 311 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 TICAM1Q8IUC6 712 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 TMEM126BQ8IUX1 230 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC30A8Q8IWU4 369 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 KIAA2013Q8IYS2 634 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 ULK2Q8IYT8 1036 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 KIF2BQ8N4N8 673 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 AGBL5Q8NDL9 886 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR8J3Q8NGG0 315 aa5.55□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR9I1Q8NGQ6 314 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms