RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 IVDP26440 423 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 GPR143P51810 404 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 CMPK2Q5EBM0 449 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 SPNS3Q6ZMD2 512 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 RGS9BPQ6ZS82 235 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 SYDE1Q6ZW31 735 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-220ENST00000458038 CDH24Q86UP0 819 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 KLHDC8AQ8IYD2 350 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 LILRB4Q8NHJ6 448 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 RND1Q92730 232 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 CFAP36Q96G28 342 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 VPS39Q96JC1 886 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 EGFL8Q99944 293 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 PLAC1Q9HBJ0 212 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 ADAP2Q9NPF8 381 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 PRTFDC1Q9NRG1 225 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 TEX264Q9Y6I9 313 aa20.06■□□□□ 0.8
CPNE1-220ENST00000458038 CTAGE15A4D2H0 777 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 LRIT2A6NDA9 550 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 ZNHIT1O43257 154 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 B3GALT2O43825 422 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 HS6ST1O60243 411 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 CDC40O60508 579 aaKnown RBP eCLIP20.05■□□□□ 0.8
CPNE1-220ENST00000458038 SAT1P21673 171 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 CHRNB4P30926 498 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 PGGT1BP53609 377 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 RAB38P57729 211 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 TESK1Q15569 626 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 TRMT10BQ6PF06 316 aaKnown RBP20.05■□□□□ 0.8
CPNE1-220ENST00000458038 SLCO4C1Q6ZQN7 724 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 CTAGE6Q86UF2 777 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 TMEM132CQ8N3T6 1108 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 MS4A6EQ96DS6 147 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 SLC17A6Q9P2U8 582 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 SNX12Q9UMY4 172 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 ERVK-11Q9UQG0 969 aa20.05■□□□□ 0.8
CPNE1-220ENST00000458038 A8MVJ9 347 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 CDC7O00311 574 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 ERI3O43414 337 aaKnown RBP20.04■□□□□ 0.8
CPNE1-220ENST00000458038 CLEC3AO75596 197 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 SLC13A2Q13183 592 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 RUNX2Q13950 521 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 EFTUD2Q15029 972 aaKnown RBP eCLIP20.04■□□□□ 0.87e-8■■■■■ 30.4
CPNE1-220ENST00000458038 ELAVL1Q15717 326 aaKnown RBP20.04■□□□□ 0.8
CPNE1-220ENST00000458038 ACAD11Q709F0 780 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 FRA10AC1Q70Z53 315 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 MDGA2Q7Z553 956 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 ZC3HC1Q86WB0 502 aaKnown RBP20.04■□□□□ 0.8
CPNE1-220ENST00000458038 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.04■□□□□ 0.8
CPNE1-220ENST00000458038 PSD4Q8NDX1 1056 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 C7orf57Q8NEG2 295 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 NCLNQ969V3 563 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 AICDAQ9GZX7 198 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 DDX47Q9H0S4 455 aaKnown RBP20.04■□□□□ 0.8
CPNE1-220ENST00000458038 EHD1Q9H4M9 534 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 POPDC3Q9HBV1 291 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 SLC24A3Q9HC58 644 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 KCNJ16Q9NPI9 418 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 HPF1Q9NWY4 346 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 NSMCE4AQ9NXX6 385 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 GPRC5BQ9NZH0 403 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 CTNNAL1Q9UBT7 734 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 IKZF3Q9UKT9 509 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 CHMP2BQ9UQN3 213 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 CLCA3PQ9Y6N3 262 aa20.04■□□□□ 0.8
CPNE1-220ENST00000458038 NPEPPSL1A6NEC2 478 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 ANKDD1BA6NHY2 528 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 C4orf51C9J302 202 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 ACOT7O00154 380 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 WDR47O94967 919 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 IGFBP2P18065 325 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 RFC3P40938 356 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 SLC6A12P48065 614 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 ARL4CP56559 192 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 KRTAP10-9P60411 292 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 MGAT5Q09328 741 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 ADPRMQ3LIE5 342 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 CDKL4Q5MAI5 379 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 TRIM40Q6P9F5 258 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 CEP128Q6ZU80 1094 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 OR2L5Q8NG80 312 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 ASB15Q8WXK1 588 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 DAZLQ92904 295 aaKnown RBP20.03■□□□□ 0.8
CPNE1-220ENST00000458038 RHBDF1Q96CC6 855 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 RUNDC3BQ96NL0 473 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 SERINC2Q96SA4 455 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 KCMF1Q9P0J7 381 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 MYOTQ9UBF9 498 aa20.03■□□□□ 0.8
CPNE1-220ENST00000458038 ZNF223Q9UK11 482 aaPredicted RBP20.03■□□□□ 0.8
CPNE1-220ENST00000458038 CTNSO60931 367 aa20.02■□□□□ 0.8
CPNE1-220ENST00000458038 HNRNPH1P31943 449 aaKnown RBP20.02■□□□□ 0.8
CPNE1-220ENST00000458038 GPR85P60893 370 aa20.02■□□□□ 0.8
CPNE1-220ENST00000458038 TGM3Q08188 693 aa20.02■□□□□ 0.8
CPNE1-220ENST00000458038 SLBPQ14493 270 aaKnown RBP eCLIP20.02■□□□□ 0.8
CPNE1-220ENST00000458038 HP1BP3Q5SSJ5 553 aaPredicted RBP20.02■□□□□ 0.8
CPNE1-220ENST00000458038 HSDL2Q6YN16 418 aa20.02■□□□□ 0.8
CPNE1-220ENST00000458038 SLC35F6Q8N357 371 aa20.02■□□□□ 0.8
CPNE1-220ENST00000458038 TCAIMQ8N3R3 496 aa20.02■□□□□ 0.8
CPNE1-220ENST00000458038 MORN4Q8NDC4 146 aa20.02■□□□□ 0.8
CPNE1-220ENST00000458038 CCT6BQ92526 530 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms