RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 DDX31Q9H8H2 851 aaKnown RBP8.29□□□□□ -1.08
RIF1-208ENST00000457745 ANKMY1Q9P2S6 941 aa8.29□□□□□ -1.08
RIF1-208ENST00000457745 CD300AQ9UGN4 299 aa8.29□□□□□ -1.08
RIF1-208ENST00000457745 ACSL6Q9UKU0 697 aa8.29□□□□□ -1.08
RIF1-208ENST00000457745 NDUFAF1Q9Y375 327 aa8.29□□□□□ -1.08
RIF1-208ENST00000457745 TMED5Q9Y3A6 229 aa8.29□□□□□ -1.08
RIF1-208ENST00000457745 HCN4Q9Y3Q4 1203 aa8.29□□□□□ -1.08
RIF1-208ENST00000457745 ATG4BQ9Y4P1 393 aa8.29□□□□□ -1.08
RIF1-208ENST00000457745 TMEM184BQ9Y519 407 aaPredicted RBP8.29□□□□□ -1.08
RIF1-208ENST00000457745 ASB4Q9Y574 426 aa8.29□□□□□ -1.08
RIF1-208ENST00000457745 ENTPD2Q9Y5L3 495 aa8.29□□□□□ -1.08
RIF1-208ENST00000457745 KIF26BQ2KJY2 2108 aa8.29□□□□□ -1.08
RIF1-208ENST00000457745 MN1Q10571 1320 aaPredicted RBP8.29□□□□□ -1.08
RIF1-208ENST00000457745 LAMA1P25391 3075 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 GNG14A0A1W2PPG7 69 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 PMS2P1A4D2B8 440 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 OR2W5A6NFC9 320 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 CFAP73A6NFT4 308 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 A8MU76 341 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 FAM227AF5H4B4 570 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 TGFBR3LH3BV60 316 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 TNFRSF10AO00220 468 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 CDX4O14627 284 aaPredicted RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 FOXS1O43638 330 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 NUDT21O43809 227 aaKnown RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 NME6O75414 186 aaPredicted RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 SCELO95171 688 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 AIFM1O95831 613 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 EIF2S1P05198 315 aaKnown RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 PGRP06401 933 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 COX7A2P14406 83 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 FOLR1P15328 257 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 GLB1P16278 677 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 ATP6V1B2P21281 511 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 HIST1H1TP22492 207 aaPredicted RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 CXCR2P25025 360 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 CNR2P34972 360 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 SSR2P43308 183 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 GZMMP51124 257 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 MMP16P51512 607 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 PDX1P52945 283 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 CASP9P55211 416 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 FOXL2P58012 376 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 OR4D2P58180 307 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 RPS15AP62244 130 aaKnown RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 BTN3A2P78410 334 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 KLC1Q07866 573 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 C2orf80Q0P641 193 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 MAD2L1Q13257 205 aaPredicted RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 NFYCQ13952 458 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 C16orf72Q14CZ0 275 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 SYT16Q17RD7 645 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 TRMT5Q32P41 509 aaKnown RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 DEFB134Q4QY38 66 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 SNAP47Q5SQN1 464 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 CCNYL2Q5T2Q4 361 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 OR4C11Q6IEV9 310 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 TMEM214Q6NUQ4 689 aaKnown RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 ZCCHC8Q6NZY4 707 aaKnown RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 HACD2Q6Y1H2 254 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 BNC2Q6ZN30 1099 aaPredicted RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 B3GNT8Q7Z7M8 397 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 TICAM1Q8IUC6 712 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 MCATQ8IVS2 390 aaKnown RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 SCUBE1Q8IWY4 988 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 METTL27Q8N6F8 245 aaPredicted RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 CSNK1A1LQ8N752 337 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 ACOT4Q8N9L9 421 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 OR2L5Q8NG80 312 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 DNAJB14Q8TBM8 379 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 ATOH1Q92858 354 aaPredicted RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 RGMAQ96B86 450 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 LRRC58Q96CX6 371 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 COQ8BQ96D53 544 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 ZNF285Q96NJ3 590 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 OR52E6Q96RD3 313 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 PITHD1Q9GZP4 211 aaPredicted RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 EFCAB1Q9HAE3 211 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 KCMF1Q9P0J7 381 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 TMEM181Q9P2C4 612 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 ABCD2Q9UBJ2 740 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 NKX1-2Q9UD57 310 aaPredicted RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 LEF1Q9UJU2 399 aaPredicted RBP8.28□□□□□ -1.08
RIF1-208ENST00000457745 CROTQ9UKG9 612 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 FBXW2Q9UKT8 454 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 MAN2B2Q9Y2E5 1009 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 OTOGLQ3ZCN5 2332 aa8.28□□□□□ -1.08
RIF1-208ENST00000457745 C1orf226A1L170 272 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 BBIP1A8MTZ0 92 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 SGK494L7N484 410 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 ACOT8O14734 319 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 ANGPT2O15123 496 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 KDM1AO60341 852 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 HNRNPCL1O60812 293 aaKnown RBP8.27□□□□□ -1.09
RIF1-208ENST00000457745 KRT36O76013 467 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 DXOO77932 396 aaKnown RBP8.27□□□□□ -1.09
RIF1-208ENST00000457745 TIAF1O95411 115 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 C6orf47O95873 294 aa8.27□□□□□ -1.09
RIF1-208ENST00000457745 RPLP0P05388 317 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms