RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ERRFI1Q9UJM3 462 aaPredicted RBP16.75■□□□□ 0.27
MSH6-207ENST00000456246 ZNF490Q9ULM2 529 aaPredicted RBP16.75■□□□□ 0.27
MSH6-207ENST00000456246 WIPF3A6NGB9 483 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 UBXN8O00124 270 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 PRAMEF4O60810 478 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 F10P00742 488 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 LDLRP01130 860 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 C2P06681 752 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 EPB42P16452 691 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 EPORP19235 508 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 CD22P20273 847 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 MAOAP21397 527 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 PLA2G16P53816 162 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 BTG2P78543 158 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 TUBA3CQ13748 450 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 NAA30Q147X3 362 aaPredicted RBP16.74■□□□□ 0.27
MSH6-207ENST00000456246 UAP1Q16222 522 aaPredicted RBP16.74■□□□□ 0.27
MSH6-207ENST00000456246 TMEM35AQ53FP2 167 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 ZNF766Q5HY98 468 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 PRAMEF9Q5VWM5 478 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 FCRLBQ6BAA4 426 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 METTL2BQ6P1Q9 378 aaKnown RBP16.74■□□□□ 0.27
MSH6-207ENST00000456246 MED27Q6P2C8 311 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 ABHD17CQ6PCB6 329 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 TUBA3EQ6PEY2 450 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 VN1R5Q7Z5H4 357 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 ZGRF1Q86YA3 2104 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 CENPLQ8N0S6 344 aaPredicted RBP16.74■□□□□ 0.27
MSH6-207ENST00000456246 TMEM178AQ8NBL3 297 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 KCTD4Q8WVF5 259 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 NXNL1Q96CM4 212 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 TAAR6Q96RI8 345 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 PRTFDC1Q9NRG1 225 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 ANGPTL3Q9Y5C1 460 aa16.74■□□□□ 0.27
MSH6-207ENST00000456246 A0A096LPK6 155 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 GABRR3A8MPY1 467 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 FAM227AF5H4B4 570 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 KLHL2O95198 593 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 MLYCDO95822 493 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 TBX6O95947 436 aaPredicted RBP16.73■□□□□ 0.27
MSH6-207ENST00000456246 INHBAP08476 426 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 CD46P15529 392 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 TYK2P29597 1187 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 MSH2P43246 934 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 PIK3CGP48736 1102 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 SERPINB9P50453 376 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 TDGF1P3P51864 188 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 BMPR2Q13873 1038 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 RUNX2Q13950 521 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 SETDB1Q15047 1291 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 C4orf17Q53FE4 359 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 CHSY3Q70JA7 882 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 RPS19BP1Q86WX3 136 aaKnown RBP16.73■□□□□ 0.27
MSH6-207ENST00000456246 LAS2Q8IYD9 372 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 MDS2Q8NDY4 140 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 MRRFQ96E11 262 aaKnown RBP16.73■□□□□ 0.27
MSH6-207ENST00000456246 TBCDQ9BTW9 1192 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 MS4A8Q9BY19 250 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 LYRM4Q9HD34 91 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 PRM3Q9NNZ6 103 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 NECTIN3Q9NQS3 549 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 PLEKHB1Q9UF11 243 aaPredicted RBP16.73■□□□□ 0.27
MSH6-207ENST00000456246 DAPP1Q9UN19 280 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 TNPO3Q9Y5L0 923 aaKnown RBP16.73■□□□□ 0.27
MSH6-207ENST00000456246 IKBKGQ9Y6K9 419 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 SPACA6W5XKT8 324 aa16.73■□□□□ 0.27
MSH6-207ENST00000456246 A0A0G2JN53 185 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 HMX2A2RU54 273 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 FCHO1O14526 889 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 UGDHO60701 494 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 STSP08842 583 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 MTHFD2P13995 350 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 GFAPP14136 432 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 CNTFP26441 200 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 CERS1P27544 350 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 ALDH18A1P54886 795 aaKnown RBP16.72■□□□□ 0.27
MSH6-207ENST00000456246 OC90Q02509 493 aaPredicted RBP16.72■□□□□ 0.27
MSH6-207ENST00000456246 SLC13A2Q13183 592 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 OR1C1Q15619 314 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.72■□□□□ 0.271e-10■■■□□ 17.6
MSH6-207ENST00000456246 GRHL2Q6ISB3 625 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 ARMC10Q8N2F6 343 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 NOA1Q8NC60 698 aaKnown RBP16.72■□□□□ 0.27
MSH6-207ENST00000456246 FAM98AQ8NCA5 519 aaKnown RBP16.72■□□□□ 0.27
MSH6-207ENST00000456246 B3GNT7Q8NFL0 401 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 ZNF473Q8WTR7 871 aaKnown RBP16.72■□□□□ 0.27
MSH6-207ENST00000456246 SLC44A1Q8WWI5 657 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 CMTM7Q96FZ5 175 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 SCMH1Q96GD3 660 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 NPAS2Q99743 824 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 CENPKQ9BS16 269 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 DEFB126Q9BYW3 111 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 CDC42EP4Q9H3Q1 356 aaKnown RBP16.72■□□□□ 0.27
MSH6-207ENST00000456246 ADAP2Q9NPF8 381 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 DMGDHQ9UI17 866 aaKnown RBP16.72■□□□□ 0.27
MSH6-207ENST00000456246 PPIEQ9UNP9 301 aaKnown RBP16.72■□□□□ 0.27
MSH6-207ENST00000456246 TSC22D4Q9Y3Q8 395 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 ASB1Q9Y576 335 aa16.72■□□□□ 0.27
MSH6-207ENST00000456246 A0A1B0GUH1 482 aa16.71■□□□□ 0.27
MSH6-207ENST00000456246 KLK8O60259 260 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms