RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 TOX3O15405 576 aaPredicted RBP10.41□□□□□ -0.74
SCN9A-205ENST00000454569 SRPX2O60687 465 aaPredicted RBP10.41□□□□□ -0.74
SCN9A-205ENST00000454569 CCDC22O60826 627 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 SEMA3DO95025 777 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 SLC35G6P0C7Q6 338 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 CPA2P48052 419 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 ARL4DP49703 201 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 DGKQP52824 942 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 LIMK1P53667 647 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 TAS2R50P59544 299 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 SQLEQ14534 574 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 NAA25Q14CX7 972 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 SYT16Q17RD7 645 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 SMU1Q2TAY7 513 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 TMEM35AQ53FP2 167 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 SPIN4Q56A73 249 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 C4orf48Q5BLP8 95 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 CCNYL2Q5T2Q4 361 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 FAM180BQ6P0A1 224 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 GLRX5Q86SX6 157 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 KMT5CQ86Y97 462 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 TMEM151BQ8IW70 566 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 RIMKLAQ8IXN7 391 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 BMPERQ8N8U9 685 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 SLC38A9Q8NBW4 561 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 OR9A4Q8NGU2 314 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 CDC26Q8NHZ8 85 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 FBXO27Q8NI29 283 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.41□□□□□ -0.74
SCN9A-205ENST00000454569 GAL3ST3Q96A11 431 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 OR6C1Q96RD1 312 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 CTRCQ99895 268 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 MAPKAP1Q9BPZ7 522 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 TEX10Q9NXF1 929 aaPredicted RBP10.41□□□□□ -0.74
SCN9A-205ENST00000454569 MCM8Q9UJA3 840 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 TRIM33Q9UPN9 1127 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 EIF3LQ9Y262 564 aaKnown RBP10.41□□□□□ -0.74
SCN9A-205ENST00000454569 NAALAD2Q9Y3Q0 740 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 ASB4Q9Y574 426 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 NUP210LQ5VU65 1888 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 GNG14A0A1W2PPG7 69 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 A0A1W2PS29 197 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 HYKKA2RU49 373 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 FITM1A5D6W6 292 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 ASPDHA6ND91 283 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 SGK494L7N484 410 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 PSMD12O00232 456 aaPredicted RBP10.4□□□□□ -0.74
SCN9A-205ENST00000454569 FBP2O00757 339 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 OR2B3O76000 313 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 IL3P08700 152 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 IDO1P14902 403 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 ALOX12P18054 663 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 ITIH1P19827 911 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 ITGAXP20702 1163 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 CAPN3P20807 821 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 HIST1H1TP22492 207 aaPredicted RBP10.4□□□□□ -0.74
SCN9A-205ENST00000454569 GSTM2P28161 218 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 ETV5P41161 510 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 SSR2P43308 183 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 ATP4BP51164 291 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 CLDN8P56748 225 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 STXBP1P61764 594 aaKnown RBP10.4□□□□□ -0.74
SCN9A-205ENST00000454569 FOXM1Q08050 763 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 RGS1Q08116 209 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 SLAMF1Q13291 335 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 GSTA3Q16772 222 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 UGT8Q16880 541 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 PDCD4Q53EL6 469 aaKnown RBP10.4□□□□□ -0.74
SCN9A-205ENST00000454569 ZNF385BQ569K4 471 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 FAM91A1Q658Y4 838 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 C18orf63Q68DL7 685 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 MRM1Q6IN84 353 aaKnown RBP10.4□□□□□ -0.74
SCN9A-205ENST00000454569 TRIM40Q6P9F5 258 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 MIER2Q8N344 545 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 TMEM52Q8NDY8 209 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 OR7A2PQ8NGA2 310 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 VPS33AQ96AX1 596 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 DPYSL5Q9BPU6 564 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 TBCDQ9BTW9 1192 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 NMRK1Q9NWW6 199 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 KCMF1Q9P0J7 381 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 C5AR2Q9P296 337 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 DHCR7Q9UBM7 475 aaKnown RBP10.4□□□□□ -0.74
SCN9A-205ENST00000454569 FBXW2Q9UKT8 454 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 ERVK-11Q9UQG0 969 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 TMED5Q9Y3A6 229 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 ATG4BQ9Y4P1 393 aa10.4□□□□□ -0.74
SCN9A-205ENST00000454569 SPTBN2O15020 2390 aa10.4□□□□□ -0.75
SCN9A-205ENST00000454569 A0A1W2PR48 441 aa10.39□□□□□ -0.75
SCN9A-205ENST00000454569 EFCAB7A8K855 629 aa10.39□□□□□ -0.75
SCN9A-205ENST00000454569 GABRR3A8MPY1 467 aa10.39□□□□□ -0.75
SCN9A-205ENST00000454569 FAM227AF5H4B4 570 aa10.39□□□□□ -0.75
SCN9A-205ENST00000454569 ZSCAN9O15535 394 aaPredicted RBP10.39□□□□□ -0.75
SCN9A-205ENST00000454569 ZNF749O43361 778 aa10.39□□□□□ -0.75
SCN9A-205ENST00000454569 GFRA3O60609 400 aa10.39□□□□□ -0.75
SCN9A-205ENST00000454569 GALR3O60755 368 aaPredicted RBP10.39□□□□□ -0.75
SCN9A-205ENST00000454569 RDH16O75452 317 aa10.39□□□□□ -0.75
SCN9A-205ENST00000454569 SLC22A3O75751 556 aa10.39□□□□□ -0.75
SCN9A-205ENST00000454569 DKK1O94907 266 aa10.39□□□□□ -0.75
SCN9A-205ENST00000454569 SCELO95171 688 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms