RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 ITGA9Q13797 1035 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 HEPACAMQ14CZ8 416 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 CARTPTQ16568 116 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 DUSP5Q16690 384 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 ZSWIM7Q19AV6 140 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 LRRC37A5PQ49AS3 106 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 TECRLQ5HYJ1 363 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 LIPKQ5VXJ0 399 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 SYCE2Q6PIF2 218 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 ARSKQ6UWY0 536 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 UNQ6126/PRO20091Q6UXV3 157 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 CDHR3Q6ZTQ4 885 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 C16orf82Q7Z2V1 217 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 TRMT11Q7Z4G4 463 aaKnown RBP3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 WDR49Q8IV35 697 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 KIRREL3Q8IZU9 778 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 GPC2Q8N158 579 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 IQCF1Q8N6M8 205 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 RNF149Q8NC42 400 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 LEMD2Q8NC56 503 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 OR52M1Q8NGK5 317 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 OR2T3Q8NH03 318 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 OR4C3Q8NH37 302 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 HPSE2Q8WWQ2 592 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 MCHR2Q969V1 340 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 HMCESQ96FZ2 354 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 SENP5Q96HI0 755 aaPredicted RBP3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 ST6GAL2Q96JF0 529 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 ERGIC2Q96RQ1 377 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 S1PR3Q99500 378 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 AGPAT1Q99943 283 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 PANK2Q9BZ23 570 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 TFB2MQ9H5Q4 396 aaKnown RBP3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 DDX31Q9H8H2 851 aaKnown RBP3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 HOMER3Q9NSC5 361 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 INTS9Q9NV88 658 aaKnown RBP3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 TBC1D13Q9NVG8 400 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 TECRQ9NZ01 308 aaKnown RBP3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 PRDM4Q9UKN5 801 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 SATB2Q9UPW6 733 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 MGAT4BQ9UQ53 548 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 PPP2R2CQ9Y2T4 447 aa3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 GREB1LQ9C091 1923 aaPredicted RBP3.73□□□□□ -1.81
HMGN3P1-201ENST00000453847 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 TRBV4-1A0A0J9YWV2 114 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CLRN2A0PK11 232 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 A8MVM7 634 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 H0YCG3 227 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 MCF2LO15068 1137 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 GLRA3O75311 464 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 VPS26AO75436 327 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 PCCBP05166 539 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CT45A8P0DMV1 189 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CT45A9P0DMV2 189 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 PRG2P13727 222 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CYP11B1P15538 503 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 GPX3P22352 226 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 ACKR3P25106 362 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 PBLDP30039 288 aaPredicted RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 HLA-FP30511 346 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 STIP1P31948 543 aaKnown RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 FCGR2BP31994 310 aaPredicted RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 PRPHP41219 470 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 SLC6A8P48029 635 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 LIMK2P53671 638 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 DSCR9P59020 149 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CHIT1Q13231 466 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 SRSF9Q13242 221 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 SNTB2Q13425 540 aaKnown RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 EXOSC7Q15024 291 aaKnown RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 NADK2Q4G0N4 442 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 GPAT3Q53EU6 434 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 PDLIM3Q53GG5 364 aaPredicted RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CT45A2Q5DJT8 189 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 TEX35Q5T0J7 233 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 PDSS1Q5T2R2 415 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 SNRNP48Q6IEG0 339 aaKnown RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CAPN13Q6MZZ7 669 aaPredicted RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CASC1Q6TDU7 716 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 TMEM207Q6UWW9 146 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 TMEM64Q6YI46 380 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 C9orf47Q6ZRZ4 202 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 C15orf52Q6ZUT6 534 aaKnown RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CREB3L2Q70SY1 520 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 SLC24A5Q71RS6 500 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 C1QL2Q7Z5L3 287 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 RBM23Q86U06 439 aaKnown RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CERS5Q8N5B7 392 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 TEX26Q8N6G2 289 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 SLC37A3Q8NCC5 494 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 OR13C3Q8NGS6 347 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 OR1L3Q8NH93 324 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 GPR148Q8TDV2 347 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CHPT1Q8WUD6 406 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 APOBEC4Q8WW27 367 aaKnown RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 SMPDL3AQ92484 453 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 FCGR1BQ92637 280 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 THRSPQ92748 146 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 NCLNQ969V3 563 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 RTP4Q96DX8 246 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms