RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 DAPP1Q9UN19 280 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 G3BP2Q9UN86 482 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 B3GNT3Q9Y2A9 372 aa15.13■□□□□ 0.01
SCAMP4-205ENST00000452128 FOXE1O00358 373 aaPredicted RBP15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 DLX3O60479 287 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 PRMT3O60678 531 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 SEC24DO94855 1032 aaPredicted RBP15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 TGFB1P01137 390 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 PIK3CGP48736 1102 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 MTTPP55157 894 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 LIM2P55344 173 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 SFT2D3Q587I9 215 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 KHDRBS2Q5VWX1 349 aaKnown RBP15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 WDR93Q6P2C0 686 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 CUZD1Q86UP6 607 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 M1APQ8TC57 530 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 PPP4R1Q8TF05 950 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 AENQ8WTP8 325 aaKnown RBP15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 HAS2Q92819 552 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 CMTM7Q96FZ5 175 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 OR51B5Q9H339 312 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 LYRM4Q9HD34 91 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 MMP25Q9NPA2 562 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 DMRT3Q9NQL9 472 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 PRDM9Q9NQV7 894 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 C19orf25Q9UFG5 118 aaPredicted RBP15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 PPIEQ9UNP9 301 aaKnown RBP15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 PLAAQ9Y263 795 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 MMACHCQ9Y4U1 282 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 PCDHGA11Q9Y5H2 935 aa15.12■□□□□ 0.01
SCAMP4-205ENST00000452128 SHANK1Q9Y566 2161 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 SCN2AQ99250 2005 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 IQANK1A0A1B0GTG1 560 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 CLEC18AA5D8T8 446 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 ESPNB1AK53 854 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 RTCAO00442 366 aaKnown RBP15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 ETHE1O95571 254 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 GSTA1P08263 222 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 PYGBP11216 843 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 MAOAP21397 527 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 HIST1H1TP22492 207 aaPredicted RBP15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 JAK1P23458 1154 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 CERS1P27544 350 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 HPDP32754 393 aaPredicted RBP15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 HSD17B3P37058 310 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 GPR143P51810 404 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 ARFIP1P53367 373 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 RAB38P57729 211 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 UNC50Q53HI1 259 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 B3GNTL1Q67FW5 361 aaPredicted RBP15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 MRM1Q6IN84 353 aaKnown RBP15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 TRIM40Q6P9F5 258 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 PAPD4Q6PIY7 484 aaKnown RBP15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 CLEC18BQ6UXF7 455 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 RPS27LQ71UM5 84 aaKnown RBP15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 ARMC10Q8N2F6 343 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 ZADH2Q8N4Q0 377 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 ACOT4Q8N9L9 421 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 CLEC18CQ8NCF0 446 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 SRFBP1Q8NEF9 429 aaKnown RBP15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 ELP5Q8TE02 316 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 CCT6BQ92526 530 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 SCYL1Q96KG9 808 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 PTCHD1Q96NR3 888 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 KCNC2Q96PR1 638 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 CDK15Q96Q40 435 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 ACTR8Q9H981 624 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 PPCSQ9HAB8 311 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 PCDHGA10Q9Y5H3 936 aa15.11■□□□□ 0.01
SCAMP4-205ENST00000452128 FLNBO75369 2602 aaKnown RBP15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 GOLGA8RI6L899 631 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 PLPP1O14494 284 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 B3GALT2O43825 422 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 SMIM24O75264 130 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 CLDN9O95484 217 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 BSGP35613 385 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 NEK2P51955 445 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 PRKAA2P54646 552 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 HSD17B7P56937 341 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 OR4D2P58180 307 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 SLC26A5P58743 744 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 CUL3Q13618 768 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 ZRSR2Q15696 482 aaKnown RBP15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 INPP5JQ15735 1006 aaPredicted RBP15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 EXT1Q16394 746 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 CPSF6Q16630 551 aaKnown RBP eCLIP15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 GGTA1PQ4G0N0 100 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 PRR30Q53SZ7 412 aaPredicted RBP15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 CHSY3Q70JA7 882 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 CATSPER1Q8NEC5 780 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 FAR2Q96K12 515 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 CSF3RQ99062 836 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 MTERF1Q99551 399 aaKnown RBP15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 MAPKAP1Q9BPZ7 522 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 CCDC77Q9BR77 488 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 SORBS1Q9BX66 1292 aaKnown RBP15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 RNF32Q9H0A6 362 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 PTGFRNQ9P2B2 879 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 TBK1Q9UHD2 729 aa15.1■□□□□ 0.01
SCAMP4-205ENST00000452128 ANGPTL3Q9Y5C1 460 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms