RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 SRMSQ9H3Y6 488 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 GALPQ9UBC7 116 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 PCDHGC4Q9Y5F7 938 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 PSAT1Q9Y617 370 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 CPSF4LA6NMK7 179 aaKnown RBP13.43□□□□□ -0.26
ITGB4-202ENST00000449880 SLC38A8A6NNN8 435 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 AFF1P51825 1210 aaKnown RBP13.43□□□□□ -0.26
ITGB4-202ENST00000449880 TAS2R50P59544 299 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 ACTC1P68032 377 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 ACTA1P68133 377 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 CIR1Q86X95 450 aaPredicted RBP13.43□□□□□ -0.26
ITGB4-202ENST00000449880 CEP97Q8IW35 865 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 ZNF471Q9BX82 626 aaPredicted RBP13.43□□□□□ -0.26
ITGB4-202ENST00000449880 SACM1LQ9NTJ5 587 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 NLGN3Q9NZ94 848 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 ADAMTS7Q9UKP4 1686 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 PCDH17O14917 1159 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 PRAF2O60831 178 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 ARHGEF15O94989 841 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 PAHP00439 452 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 CHMP24386 653 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 GRK5P34947 590 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 GDI2P50395 445 aaKnown RBP13.43□□□□□ -0.26
ITGB4-202ENST00000449880 CEBPGP53567 150 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 SPHARQ15513 63 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 DESI1Q6ICB0 168 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 TMEM220Q6QAJ8 160 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 ZNF627Q7L945 461 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 OR6Q1Q8NGQ2 317 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 TMIGD2Q96BF3 282 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 NDUFAF4Q9P032 175 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 PROM1O43490 865 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 RGS9O75916 674 aaPredicted RBP13.43□□□□□ -0.26
ITGB4-202ENST00000449880 DDX6P26196 483 aaKnown RBP eCLIP13.43□□□□□ -0.26
ITGB4-202ENST00000449880 IL12BP29460 328 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 CDKL1Q00532 357 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 SMARCD3Q6STE5 483 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 OR2L5Q8NG80 312 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 RIMS3Q9UJD0 308 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 ADAMTS5Q9UNA0 930 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 AKAP11Q9UKA4 1901 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 TRAPPC13A5PLN9 417 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 CREBL2O60519 120 aaPredicted RBP13.43□□□□□ -0.26
ITGB4-202ENST00000449880 SLC36A3Q495N2 470 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 TPGS2Q68CL5 300 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 ZNF676Q8N7Q3 588 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 ZMIZ2Q8NF64 920 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 CIDECQ96AQ7 238 aaPredicted RBP13.43□□□□□ -0.26
ITGB4-202ENST00000449880 NELL2Q99435 816 aa13.43□□□□□ -0.26
ITGB4-202ENST00000449880 IGKV6D-21A0A0A0MT36 114 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 OR1I1O60431 355 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 KAT7O95251 611 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 ITGAMP11215 1152 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 PGAM2P15259 253 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 PRKCDQ05655 676 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 RPL13AP3Q6NVV1 102 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 TNFAIP8L2Q6P589 184 aaPredicted RBP13.42□□□□□ -0.26
ITGB4-202ENST00000449880 SNX29P2Q8IUI4 249 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 CD244Q9BZW8 370 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 TMEM168Q9H0V1 697 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 DNAJC27Q9NZQ0 273 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 TCRBV3S1A0A5B6 114 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 C9IYK1 514 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 SLC31A1O15431 190 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 FOXD2O60548 495 aaPredicted RBP13.42□□□□□ -0.26
ITGB4-202ENST00000449880 NTRK2Q16620 822 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 PPP1R3AQ16821 1122 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 TBC1D25Q3MII6 688 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 C15orf39Q6ZRI6 1047 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 SCAMP5Q8TAC9 235 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 KCNJ9Q92806 393 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 KCNK13Q9HB14 408 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 AGPAT4Q9NRZ5 378 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 MGAT4CQ9UBM8 478 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 CD84Q9UIB8 345 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 NUBP2Q9Y5Y2 271 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 CYB5AP00167 134 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 RETP07949 1114 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 NCS1P62166 190 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 CDKL4Q5MAI5 379 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 REEP3Q6NUK4 255 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 B3GNT9Q6UX72 402 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 SAMD12Q8N8I0 201 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 ARNTL2Q8WYA1 636 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 ESAMQ96AP7 390 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 GAL3ST4Q96RP7 486 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 C16orf70Q9BSU1 422 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 SAV1Q9H4B6 383 aaPredicted RBP13.42□□□□□ -0.26
ITGB4-202ENST00000449880 METTL8Q9H825 291 aaKnown RBP13.42□□□□□ -0.26
ITGB4-202ENST00000449880 PLEKHA1Q9HB21 404 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 MYNNQ9NPC7 610 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 FBXW2Q9UKT8 454 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 INTS6Q9UL03 887 aaKnown RBP13.42□□□□□ -0.26
ITGB4-202ENST00000449880 FCF1Q9Y324 198 aaKnown RBP13.42□□□□□ -0.26
ITGB4-202ENST00000449880 B3GALT2O43825 422 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 NIPSNAP2O75323 286 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 INHAP05111 366 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 GNALP38405 381 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 SELPLGQ14242 412 aa13.42□□□□□ -0.26
ITGB4-202ENST00000449880 ABCA11PQ4W5N1 156 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms