RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 CPSF6Q16630 551 aaKnown RBP eCLIP11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 LIPJQ5W064 366 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 B3GNTL1Q67FW5 361 aaPredicted RBP11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 PLAG1Q6DJT9 500 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 ZNF793Q6ZN11 406 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 TIFABQ6ZNK6 161 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 RIPOR1Q6ZS17 1223 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 RPS27LQ71UM5 84 aaKnown RBP11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 CYP4X1Q8N118 509 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 PLPP5Q8NEB5 264 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 OR52B6Q8NGF0 335 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 HUS1BQ8NHY5 278 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 CPT1CQ8TCG5 803 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 ADAMTS18Q8TE60 1221 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 PPP4R1Q8TF05 950 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 MZB1Q8WU39 189 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 PSMF1Q92530 271 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 ATP6V1E2Q96A05 226 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 IMMP1LQ96LU5 166 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 PTCHD1Q96NR3 888 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 KCNC2Q96PR1 638 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 CDK15Q96Q40 435 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 SERINC2Q96SA4 455 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 CSF3RQ99062 836 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 MTERF1Q99551 399 aaKnown RBP11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 LPAR4Q99677 370 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 CCDC77Q9BR77 488 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 NPLQ9BXD5 320 aaPredicted RBP11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 NOL11Q9H8H0 719 aaKnown RBP11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 DMRT3Q9NQL9 472 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 PRDM9Q9NQV7 894 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 MAP10Q9P2G4 905 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 B3GNT3Q9Y2A9 372 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 RNF11Q9Y3C5 154 aa11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 V9GYY5 206 aaPredicted RBP11.21□□□□□ -0.61
LSP1P3-201ENST00000449530 SHANK1Q9Y566 2161 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 IGKV3D-11A0A0A0MRZ8 115 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 FOXO6A8MYZ6 492 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 OR7A17O14581 309 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 UGDHO60701 494 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 SLU7O95391 586 aaKnown RBP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 F10P00742 488 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 RPS17P08708 135 aaKnown RBP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 SBK3P0C264 359 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 CCNG1P51959 295 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 RAP1GDS1P52306 607 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 HNRNPFP52597 415 aaKnown RBP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 LIM2P55344 173 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 RPS13P62277 151 aaKnown RBP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 AP2B1P63010 937 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 TRAF3Q13114 568 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 EXT1Q16394 746 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 PLEKHN1Q494U1 663 aaPredicted RBP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 TMEM35AQ53FP2 167 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 KHDRBS2Q5VWX1 349 aaKnown RBP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 METTL2BQ6P1Q9 378 aaKnown RBP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 IGFL2Q6UWQ7 119 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 UBE3DQ7Z6J8 389 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 CUZD1Q86UP6 607 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 IQCKQ8N0W5 287 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 EFCAB3Q8N7B9 438 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 TMEM52Q8NDY8 209 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 SRFBP1Q8NEF9 429 aaKnown RBP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 ARMC2Q8NEN0 867 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 EPS8L3Q8TE67 593 aaKnown RBP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 MIB2Q96AX9 1013 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 REPS1Q96D71 796 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 CMTM7Q96FZ5 175 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 SORBS1Q9BX66 1292 aaKnown RBP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 ROGDIQ9GZN7 287 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 OR51B5Q9H339 312 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 SEMA4BQ9NPR2 832 aaPredicted RBP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 NECTIN3Q9NQS3 549 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 PRDM7Q9NQW5 492 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 PRTFDC1Q9NRG1 225 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 TMEM216Q9P0N5 145 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 ADGRE2Q9UHX3 823 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 MRPS33Q9Y291 106 aaKnown RBP11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 MMACHCQ9Y4U1 282 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 PCDHGA11Q9Y5H2 935 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 DOPEY2Q9Y3R5 2298 aa11.2□□□□□ -0.62
LSP1P3-201ENST00000449530 TCRBV16S1A1N1A0A5B0 115 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 A8MUA0 341 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 ESPNB1AK53 854 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 H0YIV9 168 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 CLDN9O95484 217 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 ICAM2P13598 275 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 TSPAN8P19075 237 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 TAC1P20366 129 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 ATP5A1P25705 553 aaKnown RBP11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 HSD17B3P37058 310 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 PIK3CBP42338 1070 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 SLC26A5P58743 744 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 ARG2P78540 354 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 ZNF33BQ06732 778 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 SLC13A2Q13183 592 aa11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 ZRSR2Q15696 482 aaKnown RBP11.19□□□□□ -0.62
LSP1P3-201ENST00000449530 INPP5JQ15735 1006 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms