RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CLCA2Q9UQC9 943 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 WBP11Q9Y2W2 641 aaKnown RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 KIF26BQ2KJY2 2108 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 DMXL1Q9Y485 3027 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 A0A0A6YYC8 382 aaPredicted RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 ZNF860A6NHJ4 632 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 I3L1I5 382 aaPredicted RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 SGK494L7N484 410 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 ZNF749O43361 778 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 AKAP10O43572 662 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 HYAL3O43820 417 aaPredicted RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 PRMT3O60678 531 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 GUCY1B2O75343 617 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 MED26O95402 600 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 AVPR1BP47901 424 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 CLNS1AP54105 237 aaKnown RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 C2orf80Q0P641 193 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 IL11RAQ14626 422 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 KRT72Q14CN4 511 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 TTLL10Q6ZVT0 673 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 IKBIPQ70UQ0 350 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 BMPERQ8N8U9 685 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 GLB1L3Q8NCI6 653 aaPredicted RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 OR9A4Q8NGU2 314 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.51■□□□□ 0.55
SGCE-207ENST00000447873 TM4SF18Q96CE8 201 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 SLC7A5P2Q9GIP4 190 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 LYARQ9NX58 379 aaKnown RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 NDOR1Q9UHB4 597 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 FBXW2Q9UKT8 454 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 CDV3Q9UKY7 258 aaKnown RBP18.51■□□□□ 0.55
SGCE-207ENST00000447873 MAPRE3Q9UPY8 281 aa18.51■□□□□ 0.55
SGCE-207ENST00000447873 C9JVG2 144 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 SLC30A4O14863 429 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 POLR1CO15160 346 aaPredicted RBP18.5■□□□□ 0.55
SGCE-207ENST00000447873 FOXS1O43638 330 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 DKK1O94907 266 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 NSA2O95478 260 aaKnown RBP18.5■□□□□ 0.55
SGCE-207ENST00000447873 IL3P08700 152 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 ALAS2P22557 587 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 IL12AP29459 219 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 HPCAL1P37235 193 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 NOVA1P51513 510 aaKnown RBP18.5■□□□□ 0.55
SGCE-207ENST00000447873 POLR2JP52435 117 aaKnown RBP18.5■□□□□ 0.55
SGCE-207ENST00000447873 KCNK10P57789 538 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 HEPACAMQ14CZ8 416 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 MAPRE2Q15555 327 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 PRAMEF17Q5VTA0 474 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 MRM1Q6IN84 353 aaKnown RBP18.5■□□□□ 0.55
SGCE-207ENST00000447873 GPR180Q86V85 440 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 TMEM126BQ8IUX1 230 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 FUNDC1Q8IVP5 155 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 DTWD1Q8N5C7 304 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 CMTM5Q96DZ9 223 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 LOXL2Q9Y4K0 774 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 ASB4Q9Y574 426 aa18.5■□□□□ 0.55
SGCE-207ENST00000447873 LOC100653049A0A140TA62 436 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 FAM234BA2RU67 622 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 B4E171 279 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 KRT34O76011 436 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 UBOX5O94941 541 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 FGF5P12034 268 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 CCL4P13236 92 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 CD1EP15812 388 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 TSPAN7P41732 249 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 HNRNPH2P55795 449 aaKnown RBP18.49■□□□□ 0.55
SGCE-207ENST00000447873 OLR1P78380 273 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 MC2RQ01718 297 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 RUNX2Q13950 521 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 FAM71E1Q6IPT2 247 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 GK5Q6ZS86 529 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 RAB11FIP2Q7L804 512 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 RIMKLAQ8IXN7 391 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 EFCAB3Q8N7B9 438 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 RP9Q8TA86 221 aaKnown RBP18.49■□□□□ 0.55
SGCE-207ENST00000447873 NUDT8Q8WV74 236 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 STARD8Q92502 1023 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 MMABQ96EY8 250 aaPredicted RBP18.49■□□□□ 0.55
SGCE-207ENST00000447873 LIN37Q96GY3 246 aaPredicted RBP18.49■□□□□ 0.55
SGCE-207ENST00000447873 CTRCQ99895 268 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 FAIM2Q9BWQ8 316 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 NPLQ9BXD5 320 aaPredicted RBP18.49■□□□□ 0.55
SGCE-207ENST00000447873 CLMPQ9H6B4 373 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 APMAPQ9HDC9 416 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 FBXO8Q9NRD0 319 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 TXLNGQ9NUQ3 528 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 ARL8BQ9NVJ2 186 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 TEX10Q9NXF1 929 aaPredicted RBP18.49■□□□□ 0.55
SGCE-207ENST00000447873 DHCR7Q9UBM7 475 aaKnown RBP18.49■□□□□ 0.55
SGCE-207ENST00000447873 PHF11Q9UIL8 331 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 DAPP1Q9UN19 280 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 SRPK3Q9UPE1 567 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 CEP250Q9BV73 2442 aa18.49■□□□□ 0.55
SGCE-207ENST00000447873 CROCCQ5TZA2 2017 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 H0YIG0 161 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 NR5A2O00482 541 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 RDH16O75452 317 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 SCRG1O75711 98 aa18.48■□□□□ 0.55
SGCE-207ENST00000447873 SNRPB2P08579 225 aaKnown RBP18.48■□□□□ 0.55
SGCE-207ENST00000447873 COX4I1P13073 169 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms