RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 HTR3AP46098 478 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 WDR5P61964 334 aaKnown RBP8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ATP1A4Q13733 1029 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 NPY5RQ15761 445 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 ALG10Q5BKT4 473 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 NCEH1Q6PIU2 408 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.24□□□□□ -1.09
PTPN3-204ENST00000446349 GTPBP3Q969Y2 492 aaKnown RBP8.24□□□□□ -1.09
PTPN3-204ENST00000446349 BORCS8Q96FH0 119 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 UCK2Q9BZX2 261 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 FKBP7Q9Y680 259 aa8.24□□□□□ -1.09
PTPN3-204ENST00000446349 FAM25EA8MYX2 175 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 LOC730098B7Z3J9 87 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 L7N2F9 121 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 PENKP01210 267 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 MYCLP1P12525 358 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 C6P13671 934 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 S100A7P31151 101 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 CHRNA4P43681 627 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 UBE2NP61088 152 aaKnown RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 VAMP2P63027 116 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 E2F1Q01094 437 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 DMWDQ09019 674 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 PLEKHN1Q494U1 663 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 P2RY8Q86VZ1 359 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 LIX1LQ8IVB5 337 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 RBM15BQ8NDT2 890 aaKnown RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 TANKQ92844 425 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 SCRN2Q96FV2 425 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 PKP4Q99569 1192 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 C1orf21Q9H246 121 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 TMEM98Q9Y2Y6 226 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 EXOSC1Q9Y3B2 195 aaKnown RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 CDK5RAP2Q96SN8 1893 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 CIB4A0PJX0 185 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 BTN3A3O00478 584 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 POLR1CO15160 346 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 ORC5O43913 435 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 GMFGO60234 142 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 HTR1AP08908 422 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 EPCAMP16422 314 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 RPS3P23396 243 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 TNFSF4P23510 183 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 TGM7Q96PF1 710 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 NELFAQ9H3P2 528 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 AKTIPQ9H8T0 292 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 A0A1B0GVC2 190 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 BCHEP06276 602 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 ANXA3P12429 323 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 PORP16435 677 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 EIF2B2P49770 351 aaKnown RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 SMARCD3Q6STE5 483 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 Q6ZVL8 140 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 GALNT5Q7Z7M9 940 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 SATL1Q86VE3 508 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 ZSWIM9Q86XI8 627 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 GOLM1Q8NBJ4 401 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 MINDY2Q8NBR6 621 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 FRMD6Q96NE9 622 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 PHF12Q96QT6 1004 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 NPLQ9BXD5 320 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 GPR62Q9BZJ7 368 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 OR8D2Q9GZM6 311 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 EHD1Q9H4M9 534 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 TM9SF3Q9HD45 589 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 RRP8O43159 456 aaKnown RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 NADKO95544 446 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 PTHP01270 115 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 CD9P21926 228 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 ST3GAL4Q11206 333 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 PON2Q15165 354 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF384Q8TF68 577 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 DIRAS2Q96HU8 199 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 SERINC2Q96SA4 455 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 PCYT2Q99447 389 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 KAT8Q9H7Z6 458 aaKnown RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 CYTH4Q9UIA0 394 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 POU2F3Q9UKI9 436 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 TRBC2A0A5B9 178 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 OR14I1A6ND48 311 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 RNF13O43567 381 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 AIREO43918 545 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 SLITRK5O94991 958 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 JUNP05412 331 aaKnown RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 PROZP22891 400 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 CD6P30203 668 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 TIA1P31483 386 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 TGFBR3Q03167 851 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF267Q14586 743 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-204ENST00000446349 PM20D1Q6GTS8 502 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 UCN3Q969E3 161 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 HCN2Q9UL51 889 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 HCN4Q9Y3Q4 1203 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 A0A096LPI6 279 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 IGLON5A6NGN9 336 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 EFCAB7A8K855 629 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 LDB2O43679 373 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 S1PR1P21453 382 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 IL1R2P27930 398 aa8.23□□□□□ -1.09
PTPN3-204ENST00000446349 CLDN10P78369 228 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms