RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 FAM181AQ8N9Y4 354 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 NELL2Q99435 816 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 GTPBP2Q9BX10 602 aaKnown RBP13.38□□□□□ -0.27
VPS52-212ENST00000445902 SLC29A3Q9BZD2 475 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 DIABLOQ9NR28 239 aa13.38□□□□□ -0.27
VPS52-212ENST00000445902 EIF3KQ9UBQ5 218 aaKnown RBP13.38□□□□□ -0.27
VPS52-212ENST00000445902 DRGXA6NNA5 263 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 ISM1B1AKI9 464 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 PDPK1O15530 556 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 LYRM1O43325 122 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 HPGDSO60760 199 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 PRAMEF4O60810 478 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 NCR1O76036 304 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 F2P00734 622 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 TRBC1P01850 177 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 ZNF7P17097 686 aaPredicted RBP13.37□□□□□ -0.27
VPS52-212ENST00000445902 SLC6A4P31645 630 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 RPIAP49247 311 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 CRISP1P54107 249 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 MTAPQ13126 283 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 TRIM71Q2Q1W2 868 aaKnown RBP13.37□□□□□ -0.27
VPS52-212ENST00000445902 ZBTB37Q5TC79 503 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 PRAMEF9Q5VWM5 478 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 TIGD3Q6B0B8 471 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 CNIH2Q6PI25 160 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 USP30Q70CQ3 517 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 OTOP2Q7RTS6 562 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 DENND1CQ8IV53 801 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 NFKBIDQ8NI38 313 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 TM9SF2Q99805 663 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 WACQ9BTA9 647 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 TMEM245Q9H330 911 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 C12orf10Q9HB07 376 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 NDUFB11Q9NX14 153 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 B3GNT2Q9NY97 397 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 ZNF224Q9NZL3 707 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 ACSL6Q9UKU0 697 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 ZFP37Q9Y6Q3 630 aaPredicted RBP13.37□□□□□ -0.27
VPS52-212ENST00000445902 TRPM7Q96QT4 1865 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 GADD45GO95257 159 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 MAPK1P28482 360 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 RHAGQ02094 409 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 MGAT3Q09327 533 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 ZNF284Q2VY69 593 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 FRMPD2BQ6IN97 320 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 GPR155Q7Z3F1 870 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 TRIM69Q86WT6 500 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 TAGAPQ8N103 731 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 ZFP41Q8N8Y5 198 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 TMEM145Q8NBT3 493 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 C11orf65Q8NCR3 313 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 OR52P1PQ8NH57 321 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 C1GALT1C1Q96EU7 318 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 DCLRE1CQ96SD1 692 aaKnown RBP13.37□□□□□ -0.27
VPS52-212ENST00000445902 DUSP26Q9BV47 211 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 ADGRE3Q9BY15 652 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 RACGAP1Q9H0H5 632 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 ATG10Q9H0Y0 220 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 CCSER2Q9H7U1 834 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 NMNAT1Q9HAN9 279 aaPredicted RBP13.37□□□□□ -0.27
VPS52-212ENST00000445902 ACER3Q9NUN7 267 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 RBFOX1Q9NWB1 397 aaKnown RBP13.37□□□□□ -0.27
VPS52-212ENST00000445902 FTSJ1Q9UET6 329 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 NUP50Q9UKX7 468 aa13.37□□□□□ -0.27
VPS52-212ENST00000445902 SPIN1Q9Y657 262 aaPredicted RBP13.37□□□□□ -0.27
VPS52-212ENST00000445902 H3BN98 237 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 TLR4O00206 839 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 SLC22A5O76082 557 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 ANXA5P08758 320 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 INPP1P49441 399 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 ATN1P54259 1190 aaPredicted RBP13.36□□□□□ -0.27
VPS52-212ENST00000445902 TAGLNQ01995 201 aaKnown RBP13.36□□□□□ -0.27
VPS52-212ENST00000445902 SNTA1Q13424 505 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 HKDC1Q2TB90 917 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 ZNF57Q68EA5 555 aaPredicted RBP13.36□□□□□ -0.27
VPS52-212ENST00000445902 ADNP2Q6IQ32 1131 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 ANKS3Q6ZW76 656 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 OR6C4Q8NGE1 309 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 KLHL6Q8WZ60 621 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 FBXO32Q969P5 355 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 TMEM80Q96HE8 168 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 SLC32A1Q9H598 525 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 SH3BP4Q9P0V3 963 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 FBXO9Q9UK97 447 aaPredicted RBP13.36□□□□□ -0.27
VPS52-212ENST00000445902 SCML2Q9UQR0 700 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 SLC22A14Q9Y267 594 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 PCDHB1Q9Y5F3 818 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 PRAMEF33A0A0G2JMD5 474 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 SH3D21A4FU49 640 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 ZAR1LA6NP61 321 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 F5H5T6 163 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 GTPBP1O00178 669 aaKnown RBP13.36□□□□□ -0.27
VPS52-212ENST00000445902 PRAMEF10O60809 474 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 IGHA2P01877 340 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 PRKAR1AP10644 381 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 CR2P20023 1033 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 ALG1LQ6GMV1 187 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 ATAD1Q8NBU5 361 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 OR4K1Q8NGD4 311 aa13.36□□□□□ -0.27
VPS52-212ENST00000445902 OR5AK3PQ8NH89 298 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms