RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 INPP5JQ15735 1006 aaPredicted RBP17.5■□□□□ 0.39
CCDC188-202ENST00000444532 PAPD4Q6PIY7 484 aaKnown RBP17.5■□□□□ 0.39
CCDC188-202ENST00000444532 ATCAYQ86WG3 371 aa17.5■□□□□ 0.39
CCDC188-202ENST00000444532 MYLK4Q86YV6 388 aaPredicted RBP17.5■□□□□ 0.39
CCDC188-202ENST00000444532 SIRT6Q8N6T7 355 aa17.5■□□□□ 0.39
CCDC188-202ENST00000444532 L3MBTL4Q8NA19 623 aa17.5■□□□□ 0.39
CCDC188-202ENST00000444532 ACMSDQ8TDX5 336 aa17.5■□□□□ 0.39
CCDC188-202ENST00000444532 REPS1Q96D71 796 aa17.5■□□□□ 0.39
CCDC188-202ENST00000444532 PRM3Q9NNZ6 103 aa17.5■□□□□ 0.39
CCDC188-202ENST00000444532 LUZP4Q9P127 313 aa17.5■□□□□ 0.39
CCDC188-202ENST00000444532 TEKT2Q9UIF3 430 aa17.5■□□□□ 0.39
CCDC188-202ENST00000444532 MRPS33Q9Y291 106 aaKnown RBP17.5■□□□□ 0.39
CCDC188-202ENST00000444532 IGKV3D-11A0A0A0MRZ8 115 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 TCRBV16S1A1N1A0A5B0 115 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 DYTNA2CJ06 578 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 CLDN4O14493 209 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 TGFB1P01137 390 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 UQCRHP07919 91 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 HSD17B7P56937 341 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 PHEXP78562 749 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 DEPDC1Q5TB30 811 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 KHDRBS2Q5VWX1 349 aaKnown RBP17.49■□□□□ 0.39
CCDC188-202ENST00000444532 H3F3CQ6NXT2 135 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 UBE3DQ7Z6J8 389 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 CUZD1Q86UP6 607 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 TMEM151AQ8N4L1 468 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 HUS1BQ8NHY5 278 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 UBLCP1Q8WVY7 318 aaPredicted RBP17.49■□□□□ 0.39
CCDC188-202ENST00000444532 HAS2Q92819 552 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 NTMT1Q9BV86 223 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 PPCSQ9HAB8 311 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 LYRM4Q9HD34 91 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 MMP25Q9NPA2 562 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 PSD3Q9NYI0 1048 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 PCTPQ9UKL6 214 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 DAPP1Q9UN19 280 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 CPAMD8Q8IZJ3 1885 aa17.49■□□□□ 0.39
CCDC188-202ENST00000444532 PRRC2CQ9Y520 2896 aaKnown RBP17.48■□□□□ 0.39
CCDC188-202ENST00000444532 OR7A17O14581 309 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 CLDN9O95484 217 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 MAOAP21397 527 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 ATP5A1P25705 553 aaKnown RBP17.48■□□□□ 0.39
CCDC188-202ENST00000444532 PTX3P26022 381 aaPredicted RBP17.48■□□□□ 0.39
CCDC188-202ENST00000444532 CERS1P27544 350 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 TSFMP43897 325 aaKnown RBP17.48■□□□□ 0.39
CCDC188-202ENST00000444532 CCNG1P51959 295 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 ARFIP1P53367 373 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 LIM2P55344 173 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 TLR1Q15399 786 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 AP5B1Q2VPB7 878 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 ABHD17BQ5VST6 288 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 B3GNTL1Q67FW5 361 aaPredicted RBP17.48■□□□□ 0.39
CCDC188-202ENST00000444532 ZNF595Q8IYB9 648 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 ATP6V1E2Q96A05 226 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 CENPKQ9BS16 269 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 RNF32Q9H0A6 362 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 NOL11Q9H8H0 719 aaKnown RBP17.48■□□□□ 0.39
CCDC188-202ENST00000444532 ANKZF1Q9H8Y5 726 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 DMRT3Q9NQL9 472 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 NECTIN3Q9NQS3 549 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 PRTFDC1Q9NRG1 225 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 STMN3Q9NZ72 180 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 RNF11Q9Y3C5 154 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 PCDHGA10Q9Y5H3 936 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 CSAG2Q9Y5P2 127 aa17.48■□□□□ 0.39
CCDC188-202ENST00000444532 SYNDIG1LA6NDD5 238 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 CYR61O00622 381 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 VPS4BO75351 444 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 SCELO95171 688 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 GSTA1P08263 222 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 SBK3P0C264 359 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 TAC1P20366 129 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 HIST1H1TP22492 207 aaPredicted RBP17.47■□□□□ 0.39
CCDC188-202ENST00000444532 SLC26A5P58743 744 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 ARG2P78540 354 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 DDX39BQ13838 428 aaKnown RBP17.47■□□□□ 0.39
CCDC188-202ENST00000444532 ZNF169Q14929 603 aaPredicted RBP17.47■□□□□ 0.39
CCDC188-202ENST00000444532 CPSF6Q16630 551 aaKnown RBP eCLIP17.47■□□□□ 0.39
CCDC188-202ENST00000444532 OR4C11Q6IEV9 310 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 SCUBE1Q8IWY4 988 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 CYP4X1Q8N118 509 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 ACOT4Q8N9L9 421 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 GALNT11Q8NCW6 608 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 RGMAQ96B86 450 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 SNRNP40Q96DI7 357 aaKnown RBP17.47■□□□□ 0.39
CCDC188-202ENST00000444532 CNDP1Q96KN2 507 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 ZNF354BQ96LW1 612 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 MTERF1Q99551 399 aaKnown RBP17.47■□□□□ 0.39
CCDC188-202ENST00000444532 C1QTNF3Q9BXJ4 246 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 OR51B5Q9H339 312 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 KCNK13Q9HB14 408 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 KCMF1Q9P0J7 381 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 TMEM216Q9P0N5 145 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 TBK1Q9UHD2 729 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 VPS4AQ9UN37 437 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 MYO18BQ8IUG5 2567 aa17.47■□□□□ 0.39
CCDC188-202ENST00000444532 A8MT66 165 aa17.46■□□□□ 0.39
CCDC188-202ENST00000444532 A8MUI8 341 aa17.46■□□□□ 0.39
CCDC188-202ENST00000444532 FOXE1O00358 373 aaPredicted RBP17.46■□□□□ 0.39
CCDC188-202ENST00000444532 SSR2P43308 183 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms