RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 PHACTR1Q9C0D0 580 aa15.24■□□□□ 0.03
CTDSP1-204ENST00000443891 REXO4Q9GZR2 422 aaKnown RBP15.24■□□□□ 0.03
CTDSP1-204ENST00000443891 RHBGQ9H310 441 aa15.24■□□□□ 0.03
CTDSP1-204ENST00000443891 KCNF1Q9H3M0 494 aa15.24■□□□□ 0.03
CTDSP1-204ENST00000443891 ADAP2Q9NPF8 381 aa15.24■□□□□ 0.03
CTDSP1-204ENST00000443891 RYDENQ9NUL5 291 aaKnown RBP15.24■□□□□ 0.03
CTDSP1-204ENST00000443891 DNAJC11Q9NVH1 559 aa15.24■□□□□ 0.03
CTDSP1-204ENST00000443891 WHRNQ9P202 907 aa15.24■□□□□ 0.03
CTDSP1-204ENST00000443891 SH3BGRL2Q9UJC5 107 aa15.24■□□□□ 0.03
CTDSP1-204ENST00000443891 TINAGQ9UJW2 476 aa15.24■□□□□ 0.03
CTDSP1-204ENST00000443891 YARS2Q9Y2Z4 477 aaKnown RBP15.24■□□□□ 0.03
CTDSP1-204ENST00000443891 FAM187AA6NFU0 413 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 STK16O75716 305 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 ZFAND5O76080 213 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 GRNP28799 593 aaKnown RBP15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 GPR143P51810 404 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 MTTPP55157 894 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 RUNX2Q13950 521 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 ZNF460Q14592 562 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 HIST2H2ACQ16777 129 aaPredicted RBP15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 PAGE2BQ5JRK9 111 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 HIST2H2AA3Q6FI13 130 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 MAATS1Q7Z4T9 603 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 ZNF227Q86WZ6 799 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 GPSM1Q86YR5 675 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 DAZLQ92904 295 aaKnown RBP15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 KIAA1191Q96A73 305 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 MTFMTQ96DP5 389 aaKnown RBP15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 PDLIM2Q96JY6 352 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 QRFPRQ96P65 431 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 TRIM31Q9BZY9 425 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 AICDAQ9GZX7 198 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 TIMMDC1Q9NPL8 285 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 WWOXQ9NZC7 414 aa15.23■□□□□ 0.03
CTDSP1-204ENST00000443891 TRBV11-1A0A0K0K1C0 115 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 CTAGE15A4D2H0 777 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 C4orf51C9J302 202 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 CTNSO60931 367 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 WISP2O76076 250 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 MYO1DO94832 1006 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 STMN1P16949 149 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 SERPINB1P30740 379 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 HNRNPH1P31943 449 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 CASP2P42575 452 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 GDF5P43026 501 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 RPL21P46778 160 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 E2F2Q14209 437 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 FASTKD3Q14CZ7 662 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 ELAVL1Q15717 326 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 TBCCQ15814 346 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 RGS9BPQ6ZS82 235 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 CTAGE6Q86UF2 777 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 CYP4Z2PQ8N1L4 340 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 CPSF7Q8N684 471 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 ZFP62Q8NB50 900 aaPredicted RBP15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 PDPRQ8NCN5 879 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 OR8K3Q8NH51 312 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 CCT6BQ92526 530 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 UBE2E3Q969T4 207 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 GPR22Q99680 433 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 COPS7BQ9H9Q2 264 aaPredicted RBP15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 LYRM4Q9HD34 91 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 PNO1Q9NRX1 252 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 FBXW2Q9UKT8 454 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 DAPP1Q9UN19 280 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 SNX24Q9Y343 169 aa15.22■□□□□ 0.03
CTDSP1-204ENST00000443891 CCDC189A1A4V9 331 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 A8MUA0 341 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 CYR61O00622 381 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 TFECO14948 347 aaPredicted RBP15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 PEX1O43933 1283 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 ITGA10O75578 1167 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 CCDC166P0CW27 439 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 SSTR2P30874 369 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 GP5P40197 560 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 KCNC1P48547 511 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 MEOX1P50221 254 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 SSR4P51571 173 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 PCDH1Q08174 1060 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 SLC13A2Q13183 592 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 BIKQ13323 160 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 SERTAD2Q14140 314 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 ZKSCAN8Q15776 578 aaPredicted RBP15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 PDK4Q16654 411 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 TMEM211Q6ICI0 200 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 ABHD17CQ6PCB6 329 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 PAOXQ6QHF9 649 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 DOLPP1Q86YN1 238 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 SULF2Q8IWU5 870 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 CHERPQ8IWX8 916 aaKnown RBP15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 MORN4Q8NDC4 146 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 AGAP11Q8TF27 550 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 UBXN10Q96LJ8 280 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 KCNC2Q96PR1 638 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 DMRTA2Q96SC8 542 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 KRT12Q99456 494 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 RBBP8Q99708 897 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 SPOCK3Q9BQ16 436 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 ERP44Q9BS26 406 aa15.21■□□□□ 0.03
CTDSP1-204ENST00000443891 TMEM79Q9BSE2 394 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms