RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CNR2P34972 360 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 SLAMF1Q13291 335 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 SLC22A8Q8TCC7 542 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 YIPF5Q969M3 257 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 NDUFB11Q9NX14 153 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ZNF226Q9NYT6 803 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 DIMT1Q9UNQ2 313 aaKnown RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 CCDC88CQ9P219 2028 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 FAM25EA8MYX2 175 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 SSX5O60225 188 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 KCNJ13O60928 360 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ZNF286BP0CG31 522 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 HSPA7P48741 367 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 THEM5Q8N1Q8 247 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PGBD3Q8N328 593 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 IKZF5Q9H5V7 419 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 NFKBIL1Q9UBC1 381 aaPredicted RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 TIMM13Q9Y5L4 95 aaPredicted RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 PLCE1Q9P212 2302 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ZNF197O14709 1029 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 RPL34P49207 117 aaKnown RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 ERVK-25P63136 954 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 CLLU1Q5K131 121 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ADGRG3Q86Y34 549 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 MARCH9Q86YJ5 346 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 SCN4BQ8IWT1 228 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 OR52P1PQ8NH57 321 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 WDFY2Q96P53 400 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 DNAJC11Q9NVH1 559 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 IL20Q9NYY1 176 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 BCORQ6W2J9 1755 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 TUBAL3A6NHL2 446 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 TLR5O60602 858 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ACSM4P0C7M7 580 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PTGER3P43115 390 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PSPHP78330 225 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PROKR2Q8NFJ6 384 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ARNT2Q9HBZ2 717 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 POLE3Q9NRF9 147 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 NDUFAF4Q9P032 175 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 KNTC1P50748 2209 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 COL1A2P08123 1366 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 MYBPHLA2RUH7 354 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ZBTB42B2RXF5 422 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 LDB2O43679 373 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 DDX39BQ13838 428 aaKnown RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 TSPAN33Q86UF1 283 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ATCAYQ86WG3 371 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 PDZD9Q8IXQ8 264 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ADGRF3Q8IZF5 1079 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 ST8SIA2Q92186 375 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 TOE1Q96GM8 510 aaKnown RBP4.83□□□□□ -1.64
HERC1-201ENST00000443617 FNDC11Q9BVV2 318 aa4.83□□□□□ -1.64
HERC1-201ENST00000443617 RICTORQ6R327 1708 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 RRASP10301 218 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 LAMP1P11279 417 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 AVPR1BP47901 424 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 HNMTP50135 292 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 MFSD13AQ14CX5 517 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SLC27A1Q6PCB7 646 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 ZNF730Q6ZMV8 503 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 TMIEQ8NEW7 156 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 OR6C4Q8NGE1 309 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 OR5T2Q8NGG2 359 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 PKP4Q99569 1192 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 DNTTIP1Q9H147 329 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 NRCAMQ92823 1304 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 FFAR2O15552 330 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 MAFKO60675 156 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 PRMT3O60678 531 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 ITGA10O75578 1167 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 RAB3AP20336 220 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 LRRC32Q14392 662 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 TRIM40Q6P9F5 258 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CLEC20AQ6ZU45 233 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 AMIGO3Q86WK7 504 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 C1orf52Q8N6N3 182 aaKnown RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 CDKN2AIPNLQ96HQ2 116 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SFXN2Q96NB2 322 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 FNIP2Q9P278 1114 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CLEC4AQ9UMR7 237 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 IGKV6-21A0A0C4DH24 114 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 NIPSNAP2O75323 286 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 IFNGR2P38484 337 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 DGKEP52429 567 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SYT12Q8IV01 421 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 TMEM86AQ8N2M4 240 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 OXR1Q8N573 874 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CLRN3Q8NCR9 226 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 ABCG5Q9H222 651 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SYNDIG1Q9H7V2 258 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 MED11Q9P086 117 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 DHRS7Q9Y394 339 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 LOC285095A0A1B0GVY8 99 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 PGRMC2O15173 223 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 LALBAP00709 142 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 JUPP14923 745 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 ASMTP46597 345 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 CRISP1P54107 249 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 LILRA4P59901 499 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms