RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 RGS1Q08116 209 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 SP140Q13342 867 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 PHKG1Q16816 387 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 DEFB113Q30KQ7 82 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 FLYWCH1Q4VC44 716 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 SEL1L2Q5TEA6 688 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 LRRC8EQ6NSJ5 796 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 IL20RBQ6UXL0 311 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 KRTAP1-3Q8IUG1 177 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 FAM109AQ8N4B1 249 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 ANKRD53Q8N9V6 530 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 GOT1L1Q8NHS2 421 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-208ENST00000443046 FAM222BQ8WU58 562 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 EEF1AKMT1Q8WVE0 214 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 SNF8Q96H20 258 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 PDLIM2Q96JY6 352 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 PWWP2AQ96N64 755 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 RASL10BQ96S79 203 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 SH3GL2Q99962 352 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 FAM173AQ9BQD7 235 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 AICDAQ9GZX7 198 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 IL1RL2Q9HB29 575 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 DMRT3Q9NQL9 472 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 HPF1Q9NWY4 346 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 MYOTQ9UBF9 498 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 B4GALT7Q9UBV7 327 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 CAPN6Q9Y6Q1 641 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 STAB1Q9NY15 2570 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 FAM47E-STBD1D6RA91 191 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 RAF1P04049 648 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 CELA3AP09093 270 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 ENDOUP21128 410 aaKnown RBP13.34□□□□□ -0.27
HMGN1-208ENST00000443046 PPP2R1BP30154 601 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 SOX3P41225 446 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 SLC1A2P43004 574 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 MAGEA5P43359 124 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 RAB8AP61006 207 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 DHX9Q08211 1270 aaKnown RBP13.34□□□□□ -0.27
HMGN1-208ENST00000443046 DHX34Q14147 1143 aaKnown RBP13.34□□□□□ -0.27
HMGN1-208ENST00000443046 BBS9Q3SYG4 887 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 FBXL19-AS1Q494R0 122 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 CATSPEREQ5SY80 951 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 C1orf185Q5T7R7 199 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 DUPD1Q68J44 220 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 GK5Q6ZS86 529 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 SEM1Q6ZVN7 128 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 Q71RC1 249 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-208ENST00000443046 CAND1Q86VP6 1230 aaKnown RBP13.34□□□□□ -0.27
HMGN1-208ENST00000443046 PRIMA1Q86XR5 153 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 LMNTD2Q8IXW0 634 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 RNF214Q8ND24 703 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 ASB15Q8WXK1 588 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 SLCO2A1Q92959 643 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 ALKBH8Q96BT7 664 aaKnown RBP13.34□□□□□ -0.27
HMGN1-208ENST00000443046 MDFIQ99750 246 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 AARSD1Q9BTE6 412 aaKnown RBP13.34□□□□□ -0.27
HMGN1-208ENST00000443046 CNPPD1Q9BV87 410 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 CCDC68Q9H2F9 335 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 KLHL31Q9H511 634 aa13.34□□□□□ -0.27
HMGN1-208ENST00000443046 LIN28AQ9H9Z2 209 aaKnown RBP13.34□□□□□ -0.27
HMGN1-208ENST00000443046 MXRA5Q9NR99 2828 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 MAGEB16A2A368 324 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 PSMD12O00232 456 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-208ENST00000443046 HCN1O60741 890 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 HAUS5O94927 633 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 SERPIND1P05546 499 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 INHBBP09529 407 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 HSD17B7P56937 341 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 ZNF750Q32MQ0 723 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 TMEM198Q66K66 360 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 POMZP3Q6PJE2 187 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 WDR53Q7Z5U6 358 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-208ENST00000443046 KIAA1328Q86T90 577 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 GOLM1Q8NBJ4 401 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 RELL2Q8NC24 303 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-208ENST00000443046 NEIL2Q969S2 332 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 SARAFQ96BY9 339 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 PYCR2Q96C36 320 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 SCYL1Q96KG9 808 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 CCDC77Q9BR77 488 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 TRIM5Q9C035 493 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 RHBGQ9H310 441 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 PLEKHF2Q9H8W4 249 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 PNO1Q9NRX1 252 aaKnown RBP13.33□□□□□ -0.28
HMGN1-208ENST00000443046 ACAD8Q9UKU7 415 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 PCDHGB3Q9Y5G1 929 aa13.33□□□□□ -0.28
HMGN1-208ENST00000443046 RTTNQ86VV8 2226 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 URADA6NGE7 173 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 G3V3Y1 287 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 ZNF354AO60765 605 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-208ENST00000443046 HEXAP06865 529 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 SERPINA6P08185 405 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 GABRA1P14867 456 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 HNF4AP41235 474 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 MAN2A2P49641 1150 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 REEP5Q00765 189 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 KIF5AQ12840 1032 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 THOC5Q13769 683 aaKnown RBP13.32□□□□□ -0.28
HMGN1-208ENST00000443046 RUNX2Q13950 521 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 SLC10A1Q14973 349 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms