RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ATMQ13315 3056 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 IDSB3KWA1 339 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 TMEM233B4DJY2 109 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 LYPLA1O75608 230 aaPredicted RBP15.12■□□□□ 0.01
USP39-205ENST00000442708 CD63P08962 238 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 BGNP21810 368 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 HIST1H1TP22492 207 aaPredicted RBP15.12■□□□□ 0.01
USP39-205ENST00000442708 HMOX2P30519 316 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 OTX2P32243 289 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 HPDP32754 393 aaPredicted RBP15.12■□□□□ 0.01
USP39-205ENST00000442708 BSGP35613 385 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 SLC18A1P54219 525 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 MTTPP55157 894 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 PHEXP78562 749 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 SSPNQ14714 243 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 ACOT4Q8N9L9 421 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 TMEM52Q8NDY8 209 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 SERINC2Q96SA4 455 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 SERPINI1Q99574 410 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 PAIP2Q9BPZ3 127 aaKnown RBP15.12■□□□□ 0.01
USP39-205ENST00000442708 TRMOQ9BU70 441 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 CRB3Q9BUF7 120 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 MRPL1Q9BYD6 325 aaKnown RBP15.12■□□□□ 0.01
USP39-205ENST00000442708 ACPTQ9BZG2 426 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 C20orf27Q9GZN8 174 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 VN1R1Q9GZP7 353 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 C14orf105Q9NVL8 296 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 C3orf18Q9UK00 162 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 NXT1Q9UKK6 140 aaKnown RBP15.12■□□□□ 0.01
USP39-205ENST00000442708 MKL2Q9ULH7 1088 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 SLC12A4Q9UP95 1085 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 PTGDR2Q9Y5Y4 395 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 HS3ST3B1Q9Y662 390 aa15.12■□□□□ 0.01
USP39-205ENST00000442708 MED13Q9UHV7 2174 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 MASP2O00187 686 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 SOCS6O14544 535 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 B3GALT2O43825 422 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 TMPRSS11DO60235 418 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 ULK1O75385 1050 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 CDC123O75794 336 aaPredicted RBP15.11■□□□□ 0.01
USP39-205ENST00000442708 SCELO95171 688 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 KRT6AP02538 564 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 GBAP04062 536 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 KRT6BP04259 564 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 RNH1P13489 461 aaKnown RBP15.11■□□□□ 0.01
USP39-205ENST00000442708 SSR2P43308 183 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 KRT6CP48668 564 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 RAP1GDS1P52306 607 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 HNRNPFP52597 415 aaKnown RBP15.11■□□□□ 0.01
USP39-205ENST00000442708 LIM2P55344 173 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 MC1RQ01726 317 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 TBL3Q12788 808 aaKnown RBP15.11■□□□□ 0.01
USP39-205ENST00000442708 ATP1A4Q13733 1029 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 AP5B1Q2VPB7 878 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 DEFB109BQ30KR1 87 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 UGT3A2Q3SY77 523 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 C10orf62Q5T681 223 aaPredicted RBP15.11■□□□□ 0.01
USP39-205ENST00000442708 HHATQ5VTY9 493 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 FAAH2Q6GMR7 532 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 NIPAL1Q6NVV3 410 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 GPR155Q7Z3F1 870 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 MRGPREQ86SM8 312 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 AMER2Q8N7J2 671 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 SRFBP1Q8NEF9 429 aaKnown RBP15.11■□□□□ 0.01
USP39-205ENST00000442708 CSF3RQ99062 836 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 MAPKAP1Q9BPZ7 522 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 NPLQ9BXD5 320 aaPredicted RBP15.11■□□□□ 0.01
USP39-205ENST00000442708 TUBB1Q9H4B7 451 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 COPS7BQ9H9Q2 264 aaPredicted RBP15.11■□□□□ 0.01
USP39-205ENST00000442708 BRF2Q9HAW0 419 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 CLK4Q9HAZ1 481 aaKnown RBP15.11■□□□□ 0.01
USP39-205ENST00000442708 DAPP1Q9UN19 280 aa15.11■□□□□ 0.01
USP39-205ENST00000442708 A0A0A6YYD5 115 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 SERTM1A2A2V5 107 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 CYR61O00622 381 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 AZIN1O14977 448 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 B4GALT2O60909 372 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 SEMA3DO95025 777 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 SERPINE1P05121 402 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 FHP07954 510 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 UROSP10746 265 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 MMP11P24347 488 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 EMP2P54851 167 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 SKP1P63208 163 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 BTG2P78543 158 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 HMGCS1Q01581 520 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 RHAGQ02094 409 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 TGM3Q08188 693 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 GALNT1Q10472 559 aaPredicted RBP15.1■□□□□ 0.01
USP39-205ENST00000442708 CSTF3Q12996 717 aaKnown RBP15.1■□□□□ 0.01
USP39-205ENST00000442708 SLAMF1Q13291 335 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 TBR1Q16650 682 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 KANK2Q63ZY3 851 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 METTL4Q8N3J2 472 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 FAM47BQ8NA70 645 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 AGR3Q8TD06 166 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 TBC1D20Q96BZ9 403 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 C8orf44Q96CB5 159 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 OR1F2PQ96R84 312 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 DDX31Q9H8H2 851 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms