RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 CEACAM8P31997 349 aaPredicted RBP12.88□□□□□ -0.35
LINC00642-202ENST00000442515 MAGEA1P43355 309 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 ZNF136P52737 540 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 SESN2P58004 480 aaPredicted RBP12.88□□□□□ -0.35
LINC00642-202ENST00000442515 CBLBQ13191 982 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 PWP1Q13610 501 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 TTLL9Q3SXZ7 439 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 HECTD2Q5U5R9 776 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 MRNIPQ6NTE8 343 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 RTL4Q6ZR62 310 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 ABHD13Q7L211 337 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 MAATS1Q7Z4T9 603 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 C17orf64Q86WR6 236 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 PRELID2Q8N945 189 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 PIP5K1AQ99755 562 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 RHBGQ9H310 441 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 SEMA4BQ9NPR2 832 aaPredicted RBP12.88□□□□□ -0.35
LINC00642-202ENST00000442515 PNO1Q9NRX1 252 aaKnown RBP12.88□□□□□ -0.35
LINC00642-202ENST00000442515 PCDHGB3Q9Y5G1 929 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 SCN3AQ9NY46 2000 aa12.88□□□□□ -0.35
LINC00642-202ENST00000442515 CCL3P10147 92 aa12.87□□□□□ -0.35
LINC00642-202ENST00000442515 RNH1P13489 461 aaKnown RBP12.87□□□□□ -0.35
LINC00642-202ENST00000442515 FDFT1P37268 417 aa12.87□□□□□ -0.35
LINC00642-202ENST00000442515 KLF1Q13351 362 aaPredicted RBP12.87□□□□□ -0.35
LINC00642-202ENST00000442515 ACSF3Q4G176 576 aaPredicted RBP12.87□□□□□ -0.35
LINC00642-202ENST00000442515 CATSPEREQ5SY80 951 aa12.87□□□□□ -0.35
LINC00642-202ENST00000442515 UBE2R2Q712K3 238 aaPredicted RBP12.87□□□□□ -0.35
LINC00642-202ENST00000442515 SDCCAG8Q86SQ7 713 aaPredicted RBP12.87□□□□□ -0.35
LINC00642-202ENST00000442515 GOLM1Q8NBJ4 401 aa12.87□□□□□ -0.35
LINC00642-202ENST00000442515 SMPDL3BQ92485 455 aa12.87□□□□□ -0.35
LINC00642-202ENST00000442515 ZNF703Q9H7S9 590 aaPredicted RBP12.87□□□□□ -0.35
LINC00642-202ENST00000442515 SACM1LQ9NTJ5 587 aa12.87□□□□□ -0.35
LINC00642-202ENST00000442515 ATG4BQ9Y4P1 393 aa12.87□□□□□ -0.35
LINC00642-202ENST00000442515 MMACHCQ9Y4U1 282 aa12.87□□□□□ -0.35
LINC00642-202ENST00000442515 EEF1E1-BLOC1S5C9J1V9 151 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 TGFBR3LH3BV60 316 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 PFDN6O15212 129 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 EEF1E1O43324 174 aaKnown RBP12.86□□□□□ -0.35
LINC00642-202ENST00000442515 OR1F1O43749 312 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 VAPBO95292 243 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 IFNB1P01574 187 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 TPM3P06753 285 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 APRTP07741 180 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 MPC1LP0DKB6 136 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 BMP7P18075 431 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 TIMP3P35625 211 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 RGS1Q08116 209 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 MBOAT1Q6ZNC8 495 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 PIWIL4Q7Z3Z4 852 aaKnown RBP12.86□□□□□ -0.35
LINC00642-202ENST00000442515 SCUBE1Q8IWY4 988 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 UTP15Q8TED0 518 aaKnown RBP12.86□□□□□ -0.35
LINC00642-202ENST00000442515 PIGTQ969N2 578 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 ALKBH8Q96BT7 664 aaKnown RBP12.86□□□□□ -0.35
LINC00642-202ENST00000442515 MFSD3Q96ES6 412 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 PERPQ96FX8 193 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 SGCZQ96LD1 299 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 SLC6A15Q9H2J7 730 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 RAB6BQ9NRW1 208 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 CLDN16Q9Y5I7 305 aa12.86□□□□□ -0.35
LINC00642-202ENST00000442515 GOLGA6L19H0YKK7 550 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 CES2O00748 559 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 ZNF354AO60765 605 aaPredicted RBP12.85□□□□□ -0.35
LINC00642-202ENST00000442515 AVILO75366 819 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 EPPINO95925 133 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 IL2RAP01589 272 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 P04436 131 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 F7P08709 466 aaPredicted RBP12.85□□□□□ -0.35
LINC00642-202ENST00000442515 TPM1P09493 284 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 ENO3P13929 434 aaPredicted RBP12.85□□□□□ -0.35
LINC00642-202ENST00000442515 HNF4AP41235 474 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 CCR8P51685 355 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 HK2P52789 917 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 RAB8AP61006 207 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 LCTLQ6UWM7 567 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 CES3Q6UWW8 571 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 HSDL2Q6YN16 418 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 CYHR1Q6ZMK1 362 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 PRUNE1Q86TP1 453 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 LACC1Q8IV20 430 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 CA13Q8N1Q1 262 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 ABHD11Q8NFV4 315 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 NT5CQ8TCD5 201 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 ATG4AQ8WYN0 398 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 DACH2Q96NX9 599 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 TCF12Q99081 682 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 IL22Q9GZX6 179 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 CLK4Q9HAZ1 481 aaKnown RBP12.85□□□□□ -0.35
LINC00642-202ENST00000442515 MED16Q9Y2X0 877 aa12.85□□□□□ -0.35
LINC00642-202ENST00000442515 SONP18583 2426 aaKnown RBP12.85□□□□□ -0.35
LINC00642-202ENST00000442515 MPDZO75970 2070 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 TCRBV7S2A1N4TA0A589 114 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 CTAGE15A4D2H0 777 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 C4orf51C9J302 202 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 RFPL3SP0C7P2 107 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 OGNP20774 298 aaKnown RBP12.84□□□□□ -0.35
LINC00642-202ENST00000442515 PIGAP37287 484 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 AGFG1P52594 562 aaKnown RBP12.84□□□□□ -0.35
LINC00642-202ENST00000442515 NAE1Q13564 534 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 HMBOX1Q6NT76 420 aa12.84□□□□□ -0.35
LINC00642-202ENST00000442515 AGTRAPQ6RW13 159 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms