RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 SYCE2Q6PIF2 218 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 TPGS1Q6ZTW0 290 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 BCDIN3DQ7Z5W3 292 aaKnown RBP8.59□□□□□ -1.03
LDB2-202ENST00000441778 SLC34A3Q8N130 599 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 C1orf52Q8N6N3 182 aaKnown RBP8.59□□□□□ -1.03
LDB2-202ENST00000441778 YIPF7Q8N8F6 280 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 TRPV1Q8NER1 839 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 NLGN4YQ8NFZ3 816 aaPredicted RBP8.59□□□□□ -1.03
LDB2-202ENST00000441778 OR4K1Q8NGD4 311 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 SUN5Q8TC36 379 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 ZFAND1Q8TCF1 268 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 WFDC5Q8TCV5 224 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 ASB11Q8WXH4 323 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 SLC6A18Q96N87 628 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 FRMD6Q96NE9 622 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 CITED4Q96RK1 184 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 PIP5K1AQ99755 562 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 TTLL2Q9BWV7 592 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 NDUFB11Q9NX14 153 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 ACSL6Q9UKU0 697 aa8.59□□□□□ -1.03
LDB2-202ENST00000441778 EXO1Q9UQ84 846 aaKnown RBP8.59□□□□□ -1.03
LDB2-202ENST00000441778 ANAPC1Q9H1A4 1944 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 SMIM30A4D0T7 59 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 C2orf78A6NCI8 922 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 AGAP14A8MT82 685 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 E7EQ34 232 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 SEC14L5O43304 696 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 MPZL2O60487 215 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 GADD45GO95257 159 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 C8GP07360 202 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 HIST1H2AGP0C0S8 130 aaPredicted RBP8.58□□□□□ -1.04
LDB2-202ENST00000441778 MSL3P1P0C860 447 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 HIST1H2ADP20671 130 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 PSMA1P25786 263 aaKnown RBP8.58□□□□□ -1.04
LDB2-202ENST00000441778 ALDH9A1P49189 494 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 PRIM2P49643 509 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 HNMTP50135 292 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 AP1S1P61966 158 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 HBA1P69905 142 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 IRF8Q02556 426 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 EEF1A2Q05639 463 aaKnown RBP8.58□□□□□ -1.04
LDB2-202ENST00000441778 RUNX1T1Q06455 604 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 FAPQ12884 760 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 HNRNPA0Q13151 305 aaKnown RBP8.58□□□□□ -1.04
LDB2-202ENST00000441778 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.58□□□□□ -1.04
LDB2-202ENST00000441778 GPR33Q49SQ1 333 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 GCNT6Q5T4J0 391 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 LIPKQ5VXJ0 399 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 ZNF770Q6IQ21 691 aaPredicted RBP8.58□□□□□ -1.04
LDB2-202ENST00000441778 GDPGP1Q6ZNW5 385 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 RFLNAQ6ZTI6 216 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 CAMKMTQ7Z624 323 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 ABI3BPQ7Z7G0 1075 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 TCTE3Q8IZS6 198 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 CAMKK1Q8N5S9 505 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 FAM46DQ8NEK8 389 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 OR4M1Q8NGD0 313 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 SLC25A46Q96AG3 418 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 HIST1H2AHQ96KK5 128 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 FAM193BQ96PV7 902 aaPredicted RBP8.58□□□□□ -1.04
LDB2-202ENST00000441778 HIST1H2AJQ99878 128 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 H2AFJQ9BTM1 129 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 GON7Q9BXV9 100 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 MCOLN1Q9GZU1 580 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.58□□□□□ -1.04
LDB2-202ENST00000441778 TMEM39AQ9NV64 488 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 ZDHHC3Q9NYG2 299 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 RNF181Q9P0P0 153 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 SH3BP4Q9P0V3 963 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 ZNF282Q9UDV7 671 aaPredicted RBP8.58□□□□□ -1.04
LDB2-202ENST00000441778 PLEKHB1Q9UF11 243 aaPredicted RBP8.58□□□□□ -1.04
LDB2-202ENST00000441778 CARD8Q9Y2G2 431 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 SNX11Q9Y5W9 270 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 DSPPQ9NZW4 1301 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 TRBV4-1A0A0J9YWV2 114 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 A0A1W2PQL4 384 aaPredicted RBP8.58□□□□□ -1.04
LDB2-202ENST00000441778 NPIPB15A6NHN6 443 aaPredicted RBP8.58□□□□□ -1.04
LDB2-202ENST00000441778 OR6C75A6NL08 312 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 TLR4O00206 839 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 SOX14O95416 240 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 ANXA4P09525 319 aaPredicted RBP8.58□□□□□ -1.04
LDB2-202ENST00000441778 CCNYL3P0C7X3 344 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 GPC1P35052 558 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 CSKP41240 450 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 HMGA2P52926 109 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 NKX3-2P78367 333 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 GPR17Q13304 367 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 ATP13A5Q4VNC0 1218 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 XKR6Q5GH73 641 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 ADGRF1Q5T601 910 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 XKRXQ6PP77 449 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 SERPINA13PQ6UXR4 307 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 GPR156Q8NFN8 814 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 ANGPTL6Q8NI99 470 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 CREB3L4Q8TEY5 395 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 GEMIN6Q8WXD5 167 aaKnown RBP8.58□□□□□ -1.04
LDB2-202ENST00000441778 LINC01599Q8WXQ3 324 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 SNAPC3Q92966 411 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 TMEM80Q96HE8 168 aa8.58□□□□□ -1.04
LDB2-202ENST00000441778 DIRAS2Q96HU8 199 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms