RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 SAC3D1A6NKF1 404 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 RHPN2P1A8MT19 583 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 CXCR6O00574 342 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 UBXN7O94888 489 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 RETP07949 1114 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 ANXA4P09525 319 aaPredicted RBP20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 RPL3P39023 403 aaKnown RBP20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 ANXA8L1Q5VT79 327 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 OR4F3Q6IEY1 312 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 SPRED1Q7Z699 444 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 RNF175Q8N4F7 328 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 CBR4Q8N4T8 237 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 C1orf52Q8N6N3 182 aaKnown RBP20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 TRAPPC9Q96Q05 1148 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 REXO4Q9GZR2 422 aaKnown RBP20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 ARRDC1-AS1Q9H2J1 176 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 NLGN3Q9NZ94 848 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 LRIT1Q9P2V4 623 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 FEZF1A0PJY2 475 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 OR5K3A6NET4 321 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 ANKDD1BA6NHY2 528 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 CER1O95813 267 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 ALPPL2P10696 532 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 UGT2B7P16662 529 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 MPLP40238 635 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 PIK3CBP42338 1070 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 ADNP2Q6IQ32 1131 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 GALNT18Q6P9A2 607 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 CALHM3Q86XJ0 350 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 GFM2Q969S9 779 aaKnown RBP20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 REXO5Q96IC2 774 aaKnown RBP20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 NT5DC2Q9H857 520 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 SLC6A20Q9NP91 592 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 GMEB2Q9UKD1 530 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 PCDHGA5Q9Y5G8 931 aa20.43■□□□□ 0.86
CDKN1C-204ENST00000440480 FAM149AA5PLN7 773 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 LILRA5A6NI73 299 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 SOCS2O14508 198 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 SCAMP2O15127 329 aaKnown RBP20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 CLOCKO15516 846 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 OR1F1O43749 312 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 EPN2O95208 641 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 RASAL1O95294 804 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 LINGO3P0C6S8 592 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 PPIBP23284 216 aaKnown RBP20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 TIA1P31483 386 aaKnown RBP eCLIP20.42■□□□□ 0.863e-8■■■■■ 49.2
CDKN1C-204ENST00000440480 RPS13P62277 151 aaKnown RBP20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 UGT8Q16880 541 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 CPTPQ5TA50 214 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 KRT80Q6KB66 452 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 CAMKMTQ7Z624 323 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 SERPINA11Q86U17 422 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 FLVCR1-AS1Q8TAF5 88 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 ZNF696Q9H7X3 374 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 UBAP1Q9NZ09 502 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 CACNA1EQ15878 2313 aa20.42■□□□□ 0.86
CDKN1C-204ENST00000440480 GNG14A0A1W2PPG7 69 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 NUDT21O43809 227 aaKnown RBP20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 IL1RNP18510 177 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 PPM1FP49593 454 aaPredicted RBP20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 REEP5Q00765 189 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 ZCCHC8Q6NZY4 707 aaKnown RBP20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 ERICH5Q6P6B1 374 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 SPESP1Q6UW49 350 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 KANSL1Q7Z3B3 1105 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 ANKRD46Q86W74 232 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 CHERPQ8IWX8 916 aaKnown RBP20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 SLC35F3Q8IY50 421 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 TBC1D19Q8N5T2 526 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 RSC1A1Q92681 617 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 NCLNQ969V3 563 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 INPP5KQ9BT40 448 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 TBCDQ9BTW9 1192 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 DUSP26Q9BV47 211 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 GTPBP2Q9BX10 602 aaKnown RBP20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 RHBGQ9H310 441 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 IKZF5Q9H5V7 419 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 MAGIXQ9H6Y5 334 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 BTNL2Q9UIR0 455 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 OAZ3Q9UMX2 235 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 CORO2BQ9UQ03 480 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 KLHL20Q9Y2M5 609 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 RNF215Q9Y6U7 377 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 PCDH7O60245 1069 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 GLB1P16278 677 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 HOXB9P17482 250 aaPredicted RBP20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 ALDH4A1P30038 563 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 GTDC1Q4AE62 458 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 NHSL2Q5HYW2 709 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 ZNF438Q7Z4V0 828 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 R3HCC1LQ7Z5L2 792 aaKnown RBP20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 OR7A2PQ8NGA2 310 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 CDC26Q8NHZ8 85 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 FAM110BQ8TC76 370 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 VPS50Q96JG6 964 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 LRFN3Q9BTN0 628 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 ANKRD60Q9BZ19 345 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 DMRT3Q9NQL9 472 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 ATAD3AQ9NVI7 634 aa20.41■□□□□ 0.86
CDKN1C-204ENST00000440480 NDUFA13Q9P0J0 144 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms