RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 SEMA3DO95025 777 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 SCELO95171 688 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 SERPINB5P36952 375 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 SLC18A1P54219 525 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 CHI3L2Q15782 390 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 MINDY4Q4G0A6 757 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 MFSD4BQ5TF39 518 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 HHATQ5VTY9 493 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 GPR155Q7Z3F1 870 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 MRGPREQ86SM8 312 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 PPP1R14CQ8TAE6 165 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 RGMAQ96B86 450 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 OR1F2PQ96R84 312 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 PAIP2Q9BPZ3 127 aaKnown RBP15.97■□□□□ 0.15
TARDBP-203ENST00000439080 TBCDQ9BTW9 1192 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 NPLQ9BXD5 320 aaPredicted RBP15.97■□□□□ 0.15
TARDBP-203ENST00000439080 ZNF717Q9BY31 904 aaPredicted RBP15.97■□□□□ 0.15
TARDBP-203ENST00000439080 ROGDIQ9GZN7 287 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 BRF2Q9HAW0 419 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 CLK4Q9HAZ1 481 aaKnown RBP15.97■□□□□ 0.15
TARDBP-203ENST00000439080 NKIRAS1Q9NYS0 192 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 C3orf18Q9UK00 162 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 SLC12A4Q9UP95 1085 aa15.97■□□□□ 0.15
TARDBP-203ENST00000439080 IDSB3KWA1 339 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 ULK1O75385 1050 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 FHP07954 510 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 RNH1P13489 461 aaKnown RBP15.96■□□□□ 0.15
TARDBP-203ENST00000439080 HIST1H1TP22492 207 aaPredicted RBP15.96■□□□□ 0.15
TARDBP-203ENST00000439080 ATP5A1P25705 553 aaKnown RBP15.96■□□□□ 0.15
TARDBP-203ENST00000439080 ARRB2P32121 409 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 TSFMP43897 325 aaKnown RBP15.96■□□□□ 0.15
TARDBP-203ENST00000439080 EFNA3P52797 238 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 ARFIP1P53367 373 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 WDR4P57081 412 aaKnown RBP15.96■□□□□ 0.15
TARDBP-203ENST00000439080 CSTF3Q12996 717 aaKnown RBP15.96■□□□□ 0.15
TARDBP-203ENST00000439080 SSPNQ14714 243 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 ABRAXAS2Q15018 415 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 AP5B1Q2VPB7 878 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 ARL13AQ5H913 290 aaPredicted RBP15.96■□□□□ 0.15
TARDBP-203ENST00000439080 CLEC6AQ6EIG7 209 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 OR4C11Q6IEV9 310 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 PPP1R32Q7Z5V6 425 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 LAPTM4BQ86VI4 370 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 ACOT4Q8N9L9 421 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 OR6Y1Q8NGX8 325 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 TBC1D20Q96BZ9 403 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 ACBD3Q9H3P7 528 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 EML4Q9HC35 981 aaKnown RBP15.96■□□□□ 0.15
TARDBP-203ENST00000439080 SEMA3GQ9NS98 782 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 MKL2Q9ULH7 1088 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 POLHQ9Y253 713 aa15.96■□□□□ 0.15
TARDBP-203ENST00000439080 HMGB1P1B2RPK0 211 aaPredicted RBP15.95■□□□□ 0.14
TARDBP-203ENST00000439080 PSMD12O00232 456 aaPredicted RBP15.95■□□□□ 0.14
TARDBP-203ENST00000439080 SERPINE1P05121 402 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 HEXBP07686 556 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 UROSP10746 265 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 HSD3B1P14060 373 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 BGNP21810 368 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 IL10P22301 178 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 JAK1P23458 1154 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 MMP11P24347 488 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 HSD3B2P26439 372 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 LIM2P55344 173 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 RAB38P57729 211 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 GALNT1Q10472 559 aaPredicted RBP15.95■□□□□ 0.14
TARDBP-203ENST00000439080 ATP1A4Q13733 1029 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 RUNX2Q13950 521 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 DEFB109BQ30KR1 87 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 CES4AQ5XG92 561 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 NUDT13Q86X67 352 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 ADAMTS18Q8TE60 1221 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 THAP4Q8WY91 577 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 CATSPER2Q96P56 530 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 MRPL1Q9BYD6 325 aaKnown RBP15.95■□□□□ 0.14
TARDBP-203ENST00000439080 ACPTQ9BZG2 426 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 VN1R1Q9GZP7 353 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 LANCL2Q9NS86 450 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 DAPP1Q9UN19 280 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 MAN2B2Q9Y2E5 1009 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 FIS1Q9Y3D6 152 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 HS3ST3B1Q9Y662 390 aa15.95■□□□□ 0.14
TARDBP-203ENST00000439080 TMEM233B4DJY2 109 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 AZIN1O14977 448 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 EEDO75530 441 aaKnown RBP15.94■□□□□ 0.14
TARDBP-203ENST00000439080 IGHEP01854 428 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 NEFHP12036 1026 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 SERPINB3P29508 390 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 BSGP35613 385 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 EMP2P54851 167 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 ZNF33BQ06732 778 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 SH2D4BQ5SQS7 431 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 KANK2Q63ZY3 851 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 ATG14Q6ZNE5 492 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 ZCCHC7Q8N3Z6 543 aaKnown RBP15.94■□□□□ 0.14
TARDBP-203ENST00000439080 FAM47BQ8NA70 645 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 AGR3Q8TD06 166 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 CSF3RQ99062 836 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 MESP1Q9BRJ9 268 aa15.94■□□□□ 0.14
TARDBP-203ENST00000439080 CACNA1BQ00975 2339 aa15.93■□□□□ 0.14
TARDBP-203ENST00000439080 A0A0A6YYD5 115 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms