RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 PDZK1Q5T2W1 519 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 ATG9BQ674R7 924 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 BORAQ6PGQ7 559 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 SLC22A15Q8IZD6 547 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 NATD1Q8N6N6 113 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 CHCHD6Q9BRQ6 235 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 OR51B4Q9Y5P0 310 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 FAM25AB3EWG3 89 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 FAM25CB3EWG5 89 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 FAM25GB3EWG6 89 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 SEMA4FO95754 770 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 ANGPTL1O95841 491 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 LAMP1P11279 417 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 IL12AP29459 219 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 TXNL4AP83876 142 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 LRP8Q14114 963 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 ANGPT1Q15389 498 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 OR2T5Q6IEZ7 315 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 PARM1Q6UWI2 310 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 CLECL1Q8IZS7 167 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 RNF175Q8N4F7 328 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 OR2T29Q8NH02 315 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 PROKR1Q8TCW9 393 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 RASSF5Q8WWW0 418 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 GTPBP3Q969Y2 492 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 PYURFQ96I23 114 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 MCCC1Q96RQ3 725 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 LYSMD1Q96S90 227 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 HDHD2Q9H0R4 259 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 FBRSQ9HAH7 460 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 NEUROD4Q9HD90 331 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 CLN6Q9NWW5 311 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 GPRC5BQ9NZH0 403 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 CA14Q9ULX7 337 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 GPR34Q9UPC5 381 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 NEU3Q9UQ49 428 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 PCDHGB3Q9Y5G1 929 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 BRCA1P38398 1863 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 TPST2O60704 377 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 GADD45GO95257 159 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 BCHEP06276 602 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 MYL12AP19105 171 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 CCT3P49368 545 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 SLC13A2Q13183 592 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 ANKRD54Q6NXT1 300 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 PLEKHM3Q6ZWE6 761 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 PLPP6Q8IY26 295 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRSS58Q8IYP2 241 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 OR2L2Q8NH16 312 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 NFKBIDQ8NI38 313 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 DNASE1L2Q92874 299 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 NELL2Q99435 816 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 APOOQ9BUR5 198 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 ANKHQ9HCJ1 492 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 SMOXQ9NWM0 555 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 TAS2R9Q9NYW1 312 aa11.1□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRR23D1E9PI22 279 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 UGDHO60701 494 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 CCNKO75909 580 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRR23D2P0DMB1 279 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 SDC1P18827 310 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 HNRNPA2B1P22626 353 aaKnown RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 PIK3CBP42338 1070 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 CRISP3P54108 245 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 DCDC1P59894 354 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 DCST1Q5T197 706 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 FAM109BQ6ICB4 259 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 Q6ZSR9 355 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 VN1R5Q7Z5H4 357 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 AMIGO1Q86WK6 493 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 RNF130Q86XS8 419 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 TMEM126BQ8IUX1 230 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 TTC29Q8NA56 475 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 PIK3C3Q8NEB9 887 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 RAB8BQ92930 207 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 CNPPD1Q9BV87 410 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 PCDHB3Q9Y5E6 796 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 LCTP09848 1927 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 ATG2BQ96BY7 2078 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 SMIM30A4D0T7 59 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 A8MV72 311 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 FADS2P1A8MWK0 482 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 OR7A17O14581 309 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 C1orf105O95561 183 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZNF155Q12901 538 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 LASP1Q14847 261 aaKnown RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 LARS2Q15031 903 aaKnown RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 IRF4Q15306 451 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 VMACQ2NL98 169 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.09□□□□□ -0.632e-7■■■■■ 35.5
TRAPPC9-202ENST00000438773 GPR153Q6NV75 609 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 PDZD3Q86UT5 571 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 PACRGLQ8N7B6 248 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 MAFAQ8NHW3 353 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 LMX1AQ8TE12 382 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 VAPAQ9P0L0 249 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 THAP10Q9P2Z0 257 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 GMEB2Q9UKD1 530 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 SARDHQ9UL12 918 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 SCML1Q9UN30 329 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms