RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 PRAF2O60831 178 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 TECTAO75443 2155 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 DFFBO76075 338 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 LUC7L3O95232 432 aaKnown RBP2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 SERPING1P05155 500 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 GPIP06744 558 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 HMOX1P09601 288 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 CEBPBP17676 345 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 WNT5AP41221 380 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 RGS7P49802 495 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 CCL23P55773 120 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 RIPPLY3P57055 190 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 PTENP60484 403 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 IRX3P78415 501 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 RBP5P82980 135 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 ROR1Q01973 937 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 KLC1Q07866 573 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 TRAP1Q12931 704 aaKnown RBP2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 HNRNPDQ14103 355 aaKnown RBP2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 TMEM187Q14656 261 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 PTGISQ16647 500 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 HECTD3Q5T447 861 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 LCN1P1Q5VSP4 162 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 SHEQ5VZ18 495 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 FAM91A1Q658Y4 838 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 OR4A47Q6IF82 309 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 TMEM207Q6UWW9 146 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 TMEM182Q6ZP80 229 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 ANKRD33Q7Z3H0 272 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 NRARPQ7Z6K4 114 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 KRT77Q7Z794 578 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 PIGWQ7Z7B1 504 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 GLRX5Q86SX6 157 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 RPAINQ86UA6 219 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 DZIP1Q86YF9 867 aaKnown RBP2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 KLHL7Q8IXQ5 586 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 KMT2EQ8IZD2 1858 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 KIRREL3Q8IZU9 778 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 APCDD1Q8J025 514 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 NDUFAF2Q8N183 169 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 SIX6OS1Q8N1H7 587 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 NOA1Q8NC60 698 aaKnown RBP2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 GPRC5AQ8NFJ5 357 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 DEPDC1BQ8WUY9 529 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 TSACCQ96A04 125 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 PYCR2Q96C36 320 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 RPGRIP1Q96KN7 1286 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 ART5Q96L15 291 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 CCDC114Q96M63 670 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 OPRPNQ99935 248 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 PIGQQ9BRB3 760 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 ADPGKQ9BRR6 497 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 CPVLQ9H3G5 476 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 RIMS4Q9H426 269 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 ZWILCHQ9H900 591 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 CHST11Q9NPF2 352 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 BARHL2Q9NY43 387 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 RASAL2Q9UJF2 1139 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 GTF3C4Q9UKN8 822 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 TBX21Q9UL17 535 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 PPP2R2CQ9Y2T4 447 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 UBR2Q8IWV8 1755 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 RFX7Q2KHR2 1363 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 ZFYVE26Q68DK2 2539 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 ZNF462Q96JM2 2506 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 TRAV24A0A0B4J272 114 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 MEIOCA2RUB1 952 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 HTR3EA5X5Y0 456 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 SNURFLB1AK76 121 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 ZNF195O14628 629 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 WDR46O15213 610 aaKnown RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 KINO60870 393 aaKnown RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 AP2A2O94973 939 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 PGLSO95336 258 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 SLU7O95391 586 aaKnown RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 RPN1P04843 607 aaKnown RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 ZFYP08048 801 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 VIMP08670 466 aaKnown RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 SPP1P10451 314 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 ADRA2CP18825 462 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 PSMA3P25788 255 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 PSMB4P28070 264 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 MAGEA11P43364 429 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 TNNT3P45378 269 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 KCNJ1P48048 391 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 HERV-K104P61576 105 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 BFSP1Q12934 665 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 PTK6Q13882 451 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 SCARB2Q14108 478 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 TAZQ16635 292 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 UGCGQ16739 394 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 ZFP69Q49AA0 526 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 TCEAL5Q5H9L2 206 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 ADAMTSL4-AS1Q5T5F5 129 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 N4BP2L1Q5TBK1 243 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 UGT3A1Q6NUS8 523 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 FAAP20Q6NZ36 180 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 BHLHB9Q6PI77 547 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 GPR142Q7Z601 462 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms