RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 UGT2B11O75310 529 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 TGFB1P01137 390 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 ASGR2P07307 311 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 BMP4P12644 408 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 IL1RNP18510 177 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 DRD1P21728 446 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 TGM1P22735 817 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 MAPK9P45984 424 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 ADPRHP54922 357 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 RPS21P63220 83 aaKnown RBP13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 OCA2Q04671 838 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 TUBA3CQ13748 450 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 SLBPQ14493 270 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 AGERQ15109 404 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 SF3B4Q15427 424 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 OR2T5Q6IEZ7 315 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 MED27Q6P2C8 311 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 CYP4Z1Q86W10 505 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 HIPK1Q86Z02 1210 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 OR4K1Q8NGD4 311 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 OR2T29Q8NH02 315 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 RHNO1Q9BSD3 238 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 RIBC2Q9H4K1 309 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 WDR26Q9H7D7 661 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 C8orf33Q9H7E9 229 aaPredicted RBP13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 ENPP5Q9UJA9 477 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 BCKDKO14874 412 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 FABP3P05413 133 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 NPPBP16860 134 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 MAP2K4P45985 399 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 TPTEP56180 551 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 SELENBP1Q13228 472 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 SGCGQ13326 291 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 RAPSNQ13702 412 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 SIM2Q14190 667 aaPredicted RBP13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 INAQ16352 499 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 LRIT3Q3SXY7 679 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 CAPN13Q6MZZ7 669 aaPredicted RBP13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 SHQ1Q6PI26 577 aaKnown RBP13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 TP53I13Q8NBR0 393 aaPredicted RBP13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 STARD8Q92502 1023 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 HDAC2Q92769 488 aaKnown RBP13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 TEX101Q9BY14 249 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 SPNS1Q9H2V7 528 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 OR51B5Q9H339 312 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 FBRSQ9HAH7 460 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 PRDM8Q9NQV8 689 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 TM7SF3Q9NS93 570 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 SLC23A2Q9UGH3 650 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 PCDHB11Q9Y5F2 797 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 RNGTTO60942 597 aaKnown RBP13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 HSD3B1P14060 373 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 PCMT1P22061 227 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 HSD3B2P26439 372 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 MAT2AP31153 395 aaKnown RBP13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 TIA1P31483 386 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 ISL1P61371 349 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 IL5RAQ01344 420 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 ZNF33BQ06732 778 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 SLC13A2Q13183 592 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 ZNF385BQ569K4 471 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 SPIN4Q56A73 249 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 RBM48Q5RL73 367 aaKnown RBP13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 GPR155Q7Z3F1 870 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 FAM124AQ86V42 546 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 LRRTM4Q86VH4 590 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 SLC22A16Q86VW1 577 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 HORMAD1Q86X24 394 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 SCAIQ8N9R8 606 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 CHTF18Q8WVB6 975 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 DNASE1L2Q92874 299 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 MUL1Q969V5 352 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 FAM131CQ96AQ9 280 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 NRTNQ99748 197 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 C1QTNF2Q9BXJ5 285 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 RAPGEFL1Q9UHV5 662 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 PLAGL1Q9UM63 463 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 NARSO43776 548 aaKnown RBP13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 NADKO95544 446 aaPredicted RBP13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 IDSP22304 550 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 ASMTP46597 345 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 MC1RQ01726 317 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 EMX1Q04741 257 aaPredicted RBP13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 DGCR6Q14129 220 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 ZNF691Q5VV52 312 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 KIAA1161Q6NSJ0 714 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 AMZ2Q86W34 360 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 ZNF740Q8NDX6 193 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 OR4A15Q8NGL6 344 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 RPLP0P6Q8NHW5 317 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 SIPA1Q96FS4 1042 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 IL17FQ96PD4 163 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 DPEP2Q9H4A9 486 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 HMG20AQ9NP66 347 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 RPS6KA6Q9UK32 745 aa13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 EXO1Q9UQ84 846 aaKnown RBP13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 SAMHD1Q9Y3Z3 626 aaKnown RBP13.28□□□□□ -0.28
PTCHD3-201ENST00000438700 DNAH14Q0VDD8 3507 aa13.27□□□□□ -0.28
PTCHD3-201ENST00000438700 TBC1D3DA0A087WVF3 549 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms