RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PHEXP78562 749 aa23.24■■□□□ 1.31
RAPGEF1-206ENST00000438647 TLR1Q15399 786 aa23.24■■□□□ 1.31
RAPGEF1-206ENST00000438647 M1APQ8TC57 530 aa23.24■■□□□ 1.31
RAPGEF1-206ENST00000438647 TBCDQ9BTW9 1192 aa23.24■■□□□ 1.31
RAPGEF1-206ENST00000438647 TSC22D4Q9Y3Q8 395 aa23.24■■□□□ 1.31
RAPGEF1-206ENST00000438647 TENM4Q6N022 2769 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 LRRC14BA6NHZ5 514 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 CLDN4O14493 209 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 VPS4BO75351 444 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 MYBL2P10244 700 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 ARG2P78540 354 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 RUNX2Q13950 521 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 ABHD17BQ5VST6 288 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 ACMSDQ8TDX5 336 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 ATP6V1E2Q96A05 226 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 CNDP1Q96KN2 507 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 EPB41L4BQ9H329 900 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 MMP25Q9NPA2 562 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 VPS4AQ9UN37 437 aa23.23■■□□□ 1.31
RAPGEF1-206ENST00000438647 TCRBV16S1A1N1A0A5B0 115 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 SYNDIG1LA6NDD5 238 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 FAM227AF5H4B4 570 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 H0YIV9 168 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 TGFB1P01137 390 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 CERS1P27544 350 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 ARL1P40616 181 aaPredicted RBP23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 HSD17B7P56937 341 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 BTG2P78543 158 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 ZNF169Q14929 603 aaPredicted RBP23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 B3GNTL1Q67FW5 361 aaPredicted RBP23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 CUZD1Q86UP6 607 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 L3MBTL4Q8NA19 623 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 HUS1BQ8NHY5 278 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 UBLCP1Q8WVY7 318 aaPredicted RBP23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 SLC29A3Q9BZD2 475 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 PPCSQ9HAB8 311 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 PRDM7Q9NQW5 492 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 MAP10Q9P2G4 905 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 DAPP1Q9UN19 280 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 PCDHGA10Q9Y5H3 936 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 SPACA6W5XKT8 324 aa23.22■■□□□ 1.31
RAPGEF1-206ENST00000438647 IGKV3D-11A0A0A0MRZ8 115 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 CLDN9O95484 217 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 MAOAP21397 527 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 TSFMP43897 325 aaKnown RBP23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 CCNG1P51959 295 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 LIM2P55344 173 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 SLC26A5P58743 744 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 DDX39BQ13838 428 aaKnown RBP23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 AP5B1Q2VPB7 878 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 DEPDC1Q5TB30 811 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 KHDRBS2Q5VWX1 349 aaKnown RBP23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 ZNF595Q8IYB9 648 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 CYP4X1Q8N118 509 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 GALNT11Q8NCW6 608 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 HAS2Q92819 552 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 RNF32Q9H0A6 362 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 NOL11Q9H8H0 719 aaKnown RBP23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 KCNK13Q9HB14 408 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 LYRM4Q9HD34 91 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 DMRT3Q9NQL9 472 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 PRTFDC1Q9NRG1 225 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 PCTPQ9UKL6 214 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 CSAG2Q9Y5P2 127 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 SCN2AQ99250 2005 aa23.21■■□□□ 1.31
RAPGEF1-206ENST00000438647 UBR5O95071 2799 aaPredicted RBP23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 A8MUI8 341 aa23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 TAC1P20366 129 aa23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 HIST1H1TP22492 207 aaPredicted RBP23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 SSR2P43308 183 aa23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 RAP1GDS1P52306 607 aa23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 TAS2R50P59544 299 aa23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 ZNF33BQ06732 778 aa23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 CPSF6Q16630 551 aaKnown RBP eCLIP23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 ZNF354BQ96LW1 612 aa23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 MAGEB10Q96LZ2 347 aaPredicted RBP23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 MTERF1Q99551 399 aaKnown RBP23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 NTMT1Q9BV86 223 aa23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 NECTIN3Q9NQS3 549 aa23.2■■□□□ 1.3
RAPGEF1-206ENST00000438647 PRRC2CQ9Y520 2896 aaKnown RBP23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 RP1L1Q8IWN7 2480 aaPredicted RBP23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 SCELO95171 688 aa23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 ATP5A1P25705 553 aaKnown RBP23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 PTX3P26022 381 aaPredicted RBP23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 ARFIP1P53367 373 aa23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 SLC13A2Q13183 592 aa23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 PRR30Q53SZ7 412 aaPredicted RBP23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 C10orf62Q5T681 223 aaPredicted RBP23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 H3F3CQ6NXT2 135 aa23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 UBE3DQ7Z6J8 389 aa23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 SCUBE1Q8IWY4 988 aa23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 CISD2Q8N5K1 135 aaKnown RBP23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 SLC5A8Q8N695 610 aa23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 ACOT4Q8N9L9 421 aa23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 FAM47BQ8NA70 645 aa23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 RGMAQ96B86 450 aa23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 SNRNP40Q96DI7 357 aaKnown RBP23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 OR51B5Q9H339 312 aa23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 STMN3Q9NZ72 180 aa23.19■■□□□ 1.3
RAPGEF1-206ENST00000438647 ABI3Q9P2A4 366 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms