RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 C19orf57Q0VDD7 668 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 VWA5B2Q8N398 1253 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 GTPBP3Q969Y2 492 aaKnown RBP14.31□□□□□ -0.12
TOP3B-206ENST00000436282 TMEM169Q96HH4 297 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 GON7Q9BXV9 100 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 LSM2Q9Y333 95 aaKnown RBP14.31□□□□□ -0.12
TOP3B-206ENST00000436282 PRAMEF25A6NGN4 478 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 PITPNM1O00562 1244 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 CBLP22681 906 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 ITPKAP23677 461 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 PSMA1P25786 263 aaKnown RBP14.31□□□□□ -0.12
TOP3B-206ENST00000436282 CCR7P32248 378 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 SOX3P41225 446 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 AP1S1P61966 158 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 ACSM2AQ08AH3 577 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 ELOAQ14241 798 aaKnown RBP14.31□□□□□ -0.12
TOP3B-206ENST00000436282 GLYR1Q49A26 553 aaPredicted RBP14.31□□□□□ -0.12
TOP3B-206ENST00000436282 SMUG1Q53HV7 270 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 ANXA8L1Q5VT79 327 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 ACSM2BQ68CK6 577 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 TPGS1Q6ZTW0 290 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 RACGAP1Q9H0H5 632 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 IRF2BPLQ9H1B7 796 aa14.31□□□□□ -0.12
TOP3B-206ENST00000436282 ZNF334Q9HCZ1 680 aaPredicted RBP14.31□□□□□ -0.12
TOP3B-206ENST00000436282 ZNF282Q9UDV7 671 aaPredicted RBP14.31□□□□□ -0.12
TOP3B-206ENST00000436282 GABRR3A8MPY1 467 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 ERVH48-1M5A8F1 160 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 PCDH17O14917 1159 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 ABLIM3O94929 683 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 MYL9P24844 172 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 CSTF2P33240 577 aaKnown RBP eCLIP14.3□□□□□ -0.12
TOP3B-206ENST00000436282 CRYBB2P43320 205 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 LIMS1P48059 325 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 P2RX3P56373 397 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 CDKN3Q16667 212 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 ZNF648Q5T619 568 aaPredicted RBP14.3□□□□□ -0.12
TOP3B-206ENST00000436282 CACTIN-AS1Q8N1I8 211 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 ANGPTL6Q8NI99 470 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 TCF25Q9BQ70 676 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 TMEM245Q9H330 911 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 ACER3Q9NUN7 267 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 STUB1Q9UNE7 303 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 CARD8Q9Y2G2 431 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 LAMA3Q16787 3333 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 SCN5AQ14524 2016 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 B4DXG7 233 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 CNR2P34972 360 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 CRATP43155 626 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 DAB2P98082 770 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 BNC1Q01954 994 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 LARS2Q15031 903 aaKnown RBP14.3□□□□□ -0.12
TOP3B-206ENST00000436282 FAM131AQ6UXB0 335 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 CAMKMTQ7Z624 323 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 TMEM150AQ86TG1 271 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 HJURPQ8NCD3 748 aaPredicted RBP14.3□□□□□ -0.12
TOP3B-206ENST00000436282 PIP5K1AQ99755 562 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 SLC25A19Q9HC21 320 aa14.3□□□□□ -0.12
TOP3B-206ENST00000436282 SPATA6Q9NWH7 488 aaPredicted RBP14.3□□□□□ -0.12
TOP3B-206ENST00000436282 J3KTA2 159 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 SEC14L5O43304 696 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 ITGB7P26010 798 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 HNF1BP35680 557 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 ASMTP46597 345 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 HMGA2P52926 109 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 CRISP1P54107 249 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 CYP4F8P98187 520 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 SF1Q15637 639 aaKnown RBP14.29□□□□□ -0.12
TOP3B-206ENST00000436282 DEFB115Q30KQ5 88 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 LIPJQ5W064 366 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 XKRXQ6PP77 449 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 KLHL17Q6TDP4 642 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 ZNF783Q6ZMS7 281 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 CADM2Q8N3J6 435 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 FAM46DQ8NEK8 389 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 SKA2Q8WVK7 121 aaPredicted RBP14.29□□□□□ -0.12
TOP3B-206ENST00000436282 ASB11Q8WXH4 323 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 C11orf24Q96F05 449 aaPredicted RBP14.29□□□□□ -0.12
TOP3B-206ENST00000436282 TRMT61AQ96FX7 289 aaKnown RBP14.29□□□□□ -0.12
TOP3B-206ENST00000436282 FRMD6Q96NE9 622 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 DEFB118Q96PH6 123 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 VPS35Q96QK1 796 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 C11orf54Q9H0W9 315 aaPredicted RBP14.29□□□□□ -0.12
TOP3B-206ENST00000436282 CLEC4EQ9ULY5 219 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 MAPRE3Q9UPY8 281 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 HYKKA2RU49 373 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 AGAP14A8MT82 685 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 CSO75390 466 aaKnown RBP14.29□□□□□ -0.12
TOP3B-206ENST00000436282 ETFAP13804 333 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 XCR1P46094 333 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 MVDP53602 400 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 CD83Q01151 205 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 IRF8Q02556 426 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 BCL2L1Q07817 233 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 SPHARQ15513 63 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 SLC35F1Q5T1Q4 408 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 SIGIRRQ6IA17 410 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 FRMPD2BQ6IN97 320 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 ANGPTL8Q6UXH0 198 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 CCDC149Q6ZUS6 474 aa14.29□□□□□ -0.12
TOP3B-206ENST00000436282 PEX5LQ8IYB4 626 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms