RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 SNTNA6NMZ2 147 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 PDZK1P1A8MUH7 402 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 MEN1O00255 615 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 BMP4P12644 408 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 IFI30P13284 250 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 NPPBP16860 134 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 LIPAP38571 399 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 KCNC4Q03721 635 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 ZNF284Q2VY69 593 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 AGAP7PQ5VUJ5 663 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 C2orf73Q8N5S3 287 aaPredicted RBP9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 SLC5A8Q8N695 610 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 DYNC2LI1Q8TCX1 351 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 PITX2Q99697 317 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 NIPSNAP1Q9BPW8 284 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 BRF2Q9HAW0 419 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 RPRD1BQ9NQG5 326 aaKnown RBP9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 TDP1Q9NUW8 608 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 BTNL2Q9UIR0 455 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 ATG13O75143 517 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 DNAJB5O75953 348 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 SOD1P00441 154 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 GNRH1P01148 92 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 PTPN2P17706 415 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 PTGS2P35354 604 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 SLC19A1P41440 591 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 STARD3Q14849 445 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 PROX2Q3B8N5 592 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 PARS2Q7L3T8 475 aaKnown RBP9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 COMMD6Q7Z4G1 85 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 CFAP206Q8IYR0 622 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 MFSD4AQ8N468 514 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.98□□□□□ -0.812e-10■■■■■ 41.9
CLSTN1-203ENST00000435891 HRASLS5Q96KN8 279 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 TMEM246Q9BRR3 403 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 CCM2Q9BSQ5 444 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 DOHHQ9BU89 302 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 PCYT1BQ9Y5K3 369 aaPredicted RBP9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 HSPE1-MOB4S4R3N1 261 aa9.98□□□□□ -0.81
CLSTN1-203ENST00000435891 CENPXA8MT69 81 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 CENPBD1B2RD01 187 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 SPINT1O43278 529 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 TBX1O43435 398 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 FKTNO75072 461 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 C1orf105O95561 183 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 ELFN1P0C7U0 828 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 DGKEP52429 567 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 SLBPQ14493 270 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 PLEKHG7Q6ZR37 379 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 ARMC8Q8IUR7 673 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 GALNT6Q8NCL4 622 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 LRRC3BQ96PB8 259 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 ZC4H2Q9NQZ6 224 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 RAD18Q9NS91 495 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 SZT2Q5T011 3432 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 A0A1W2PQ72 361 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 OR2A25A4D2G3 310 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 SLC22A1O15245 554 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 POU2F1P14859 743 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 CD36P16671 472 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 PRKCAP17252 672 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 HOXB6P17509 224 aaKnown RBP9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 PCGF2P35227 344 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 MMP12P39900 470 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 ST13P50502 369 aaKnown RBP9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 SELENOWP63302 87 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 PPIGQ13427 754 aaKnown RBP eCLIP9.97□□□□□ -0.812e-6■■□□□ 11.9
CLSTN1-203ENST00000435891 PUS10Q3MIT2 529 aaKnown RBP9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 ZNF658BQ4V348 819 aaPredicted RBP9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 SOWAHCQ53LP3 525 aaPredicted RBP9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 PRSS48Q7RTY5 328 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 CAMKMTQ7Z624 323 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 NLGN4XQ8N0W4 816 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 CADM2Q8N3J6 435 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 C11orf65Q8NCR3 313 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 OR9Q2Q8NGE9 314 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 NFKBIDQ8NI38 313 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 LGALS12Q96DT0 336 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 FAM83CQ9BQN1 747 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 ZBTB20Q9HC78 741 aaPredicted RBP9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 IL36AQ9UHA7 158 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 TEKT2Q9UIF3 430 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 MAP4K5Q9Y4K4 846 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 KCNE2Q9Y6J6 123 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 ANTXRLA6NF34 631 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 H3BM21 787 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 TNFRSF11BO00300 401 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 TNFRSF21O75509 655 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 ATF4P18848 351 aaPredicted RBP9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 XPAP23025 273 aaPredicted RBP9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 CXCR2P25025 360 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 ASMTP46597 345 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 CRISP3P54108 245 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 CDH12P55289 794 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 SLC5A12Q1EHB4 618 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 ZNF805Q5CZA5 627 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 TCEAL5Q5H9L2 206 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 MED27Q6P2C8 311 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 C12orf40Q86WS4 652 aa9.97□□□□□ -0.81
CLSTN1-203ENST00000435891 ATL1Q8WXF7 558 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms