RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 VSNL1P62760 191 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 MFAP5Q13361 173 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 RUNX2Q13950 521 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 RASA2Q15283 850 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 CPSF6Q16630 551 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMPD4-207ENST00000435455 AP5B1Q2VPB7 878 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 BTBD16Q32M84 506 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 DEPDC1Q5TB30 811 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 KHDRBS2Q5VWX1 349 aaKnown RBP15.28■□□□□ 0.04
SMPD4-207ENST00000435455 PAPD4Q6PIY7 484 aaKnown RBP15.28■□□□□ 0.04
SMPD4-207ENST00000435455 ZNF595Q8IYB9 648 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 TMEM151AQ8N4L1 468 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 HUS1BQ8NHY5 278 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 BRIX1Q8TDN6 353 aaKnown RBP15.28■□□□□ 0.04
SMPD4-207ENST00000435455 PPP4R1Q8TF05 950 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 MZB1Q8WU39 189 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 PSMF1Q92530 271 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 RGMAQ96B86 450 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 WDR77Q9BQA1 342 aaPredicted RBP15.28■□□□□ 0.04
SMPD4-207ENST00000435455 ZBTB20Q9HC78 741 aaPredicted RBP15.28■□□□□ 0.04
SMPD4-207ENST00000435455 LYRM4Q9HD34 91 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 DMRT3Q9NQL9 472 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 PRDM7Q9NQW5 492 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 RNF11Q9Y3C5 154 aa15.28■□□□□ 0.04
SMPD4-207ENST00000435455 CPAMD8Q8IZJ3 1885 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 FLNCQ14315 2725 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 SYNDIG1LA6NDD5 238 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 FAM227AF5H4B4 570 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 GOLGA8RI6L899 631 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 OR7A17O14581 309 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 CDH16O75309 829 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 WISP1O95388 367 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 RPS17P08708 135 aaKnown RBP15.27■□□□□ 0.04
SMPD4-207ENST00000435455 SBK3P0C264 359 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 ITGAMP11215 1152 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 ATP5A1P25705 553 aaKnown RBP15.27■□□□□ 0.04
SMPD4-207ENST00000435455 PTX3P26022 381 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-207ENST00000435455 SOX11P35716 441 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 HSD17B3P37058 310 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 SSR2P43308 183 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 TSFMP43897 325 aaKnown RBP15.27■□□□□ 0.04
SMPD4-207ENST00000435455 CD97P48960 835 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 RAP1GDS1P52306 607 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 ARFIP1P53367 373 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 HSD17B7P56937 341 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 BTG2P78543 158 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 ZRSR2Q15696 482 aaKnown RBP15.27■□□□□ 0.04
SMPD4-207ENST00000435455 C10orf62Q5T681 223 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-207ENST00000435455 WDR93Q6P2C0 686 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 Q6ZS92 163 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 UBE3DQ7Z6J8 389 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 SIRT6Q8N6T7 355 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 M1APQ8TC57 530 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 MAGEB10Q96LZ2 347 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-207ENST00000435455 MTERF1Q99551 399 aaKnown RBP15.27■□□□□ 0.04
SMPD4-207ENST00000435455 C1QTNF3Q9BXJ4 246 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 ILKAPQ9H0C8 392 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-207ENST00000435455 PSD3Q9NYI0 1048 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 TMEM216Q9P0N5 145 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 PTGFRNQ9P2B2 879 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 DCDC2Q9UHG0 476 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 TEKT2Q9UIF3 430 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 PPT2Q9UMR5 302 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 DAPP1Q9UN19 280 aa15.27■□□□□ 0.04
SMPD4-207ENST00000435455 IGKV3D-11A0A0A0MRZ8 115 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 TCRBV16S1A1N1A0A5B0 115 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 FOXE1O00358 373 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-207ENST00000435455 SH3BGRLO75368 114 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 SCELO95171 688 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 OTCP00480 354 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 CELA2AP08217 269 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 KRT15P19012 456 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 MAOAP21397 527 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 HIST1H1TP22492 207 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-207ENST00000435455 ATP5F1P24539 256 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-207ENST00000435455 SLCO1A2P46721 670 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 MLLT10P55197 1068 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 LIM2P55344 173 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 HERVK_113P63132 956 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 FOXK1P85037 733 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 TRAF3Q13114 568 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 PLEKHN1Q494U1 663 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-207ENST00000435455 EMBQ6PCB8 327 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 ZNF793Q6ZN11 406 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 LINC00696Q6ZRV3 163 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 SLC22A9Q8IVM8 553 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 IQCKQ8N0W5 287 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 CYP4X1Q8N118 509 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 EFCAB3Q8N7B9 438 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 ACOT4Q8N9L9 421 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 OR52B6Q8NGF0 335 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 ZNF483Q8TF39 744 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-207ENST00000435455 NSUN5Q96P11 429 aaKnown RBP15.26■□□□□ 0.03
SMPD4-207ENST00000435455 ERVK-6Q9BXR3 956 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 OR51B5Q9H339 312 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 ZBTB26Q9HCK0 441 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 SEMA4BQ9NPR2 832 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-207ENST00000435455 PRTFDC1Q9NRG1 225 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 SPACA6W5XKT8 324 aa15.26■□□□□ 0.03
SMPD4-207ENST00000435455 A0A1W2PPM1 405 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms