RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 PCMT1P22061 227 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 PTBP1P26599 531 aaKnown RBP eCLIP7.06□□□□□ -1.283e-6■■■■■ 34.3
GARNL3-205ENST00000435213 CBSP35520 551 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 GLRBP48167 497 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 RPIAP49247 311 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 RAB10P61026 200 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 SKP1P63208 163 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 EMX1Q04741 257 aaPredicted RBP7.06□□□□□ -1.28
GARNL3-205ENST00000435213 ARHGAP40Q5TG30 622 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 DLEU7Q6UYE1 221 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 RBMS3Q6XE24 437 aaKnown RBP7.06□□□□□ -1.28
GARNL3-205ENST00000435213 SERINC5Q86VE9 423 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 ATCAYQ86WG3 371 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 SPAG16Q8N0X2 631 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 MEIOBQ8N635 442 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 ZSCAN1Q8NBB4 408 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 FBXO15Q8NCQ5 510 aaPredicted RBP7.06□□□□□ -1.28
GARNL3-205ENST00000435213 CCNYQ8ND76 341 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 BVESQ8NE79 360 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 ZNF555Q8NEP9 628 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 OR8D4Q8NGM9 314 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 MFSD3Q96ES6 412 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 BSCL2Q96G97 398 aaPredicted RBP7.06□□□□□ -1.28
GARNL3-205ENST00000435213 TEFMQ96QE5 360 aaKnown RBP7.06□□□□□ -1.28
GARNL3-205ENST00000435213 POMKQ9H5K3 350 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 ACSS2Q9NR19 701 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 CCDC167Q9P0B6 97 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 MARK1Q9P0L2 795 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 CENPFP49454 3210 aa7.06□□□□□ -1.28
GARNL3-205ENST00000435213 TTC24A2A3L6 582 aaPredicted RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 HSPA12AO43301 675 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 ORC5O43913 435 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 AIREO43918 545 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PLOD3O60568 738 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 HCN1O60741 890 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 VPS4BO75351 444 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 KRT33AO76009 404 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 HOXC4P09017 264 aaPredicted RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 FGF2P09038 288 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 SPP1P10451 314 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 CYP2B6P20813 491 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PTPN3P26045 913 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 GTF2A2P52657 109 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 SNRPEP62304 92 aaKnown RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 FOXO1Q12778 655 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PRPSAP1Q14558 356 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 DPY19L1Q2PZI1 675 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 C9orf131Q5VYM1 1079 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 KDM4DQ6B0I6 523 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 SLC25A24Q6NUK1 477 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 TRIM69Q86WT6 500 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 CNTN4Q8IWV2 1026 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 TMEM192Q8IY95 271 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 MS4A15Q8N5U1 240 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 CDYL2Q8N8U2 506 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 TCEAL4Q96EI5 215 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 RDH12Q96NR8 316 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 COL21A1Q96P44 957 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 RBP7Q96R05 134 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 TRMOQ9BU70 441 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PRDM12Q9H4Q4 367 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 INTS10Q9NVR2 710 aaKnown RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 GFOD1Q9NXC2 390 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 MAP10Q9P2G4 905 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 TPRKBQ9Y3C4 175 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 NUBP2Q9Y5Y2 271 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 H0YIV9 168 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 FABP7O15540 132 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 TXNL1O43396 289 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 OIP5O43482 229 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 DDNO94850 711 aaPredicted RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 STAG3L1P0CL83 205 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 HNF1AP20823 631 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 IGFBP5P24593 272 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 HSD3B2P26439 372 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 LIPAP38571 399 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PTGFRP43088 359 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 RPL34P49207 117 aaKnown RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 FOXM1Q08050 763 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 POU4F2Q12837 409 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 TMEM132DQ14C87 1099 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 RIPPLY2Q5TAB7 128 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 NPSR1Q6W5P4 371 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 NUP54Q7Z3B4 507 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 SLC41A1Q8IVJ1 513 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 MINDY1Q8N5J2 469 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 DNERQ8NFT8 737 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 OR10H5Q8NGA6 315 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 CELF6Q96J87 481 aaKnown RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 OSBPL2Q9H1P3 480 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 REEP4Q9H6H4 257 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 C11orf16Q9NQ32 467 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 VAPAQ9P0L0 249 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 HCN3Q9P1Z3 774 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 SPASTQ9UBP0 616 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 FZD1Q9UP38 647 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 WASF3Q9UPY6 502 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 ZNF451Q9Y4E5 1061 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 NPFFR2Q9Y5X5 522 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PAPPA2Q9BXP8 1791 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms