RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PLCXD1Q9NUJ7 323 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CLN6Q9NWW5 311 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 NKIRAS2Q9NYR9 191 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 HCN3Q9P1Z3 774 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 COPS3Q9UNS2 423 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PCDHGA9Q9Y5G4 932 aaKnown RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 STON1Q9Y6Q2 735 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 KLRG2A4D1S0 409 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF197O14709 1029 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 SUV39H1O43463 412 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PAHP00439 452 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 EGFRP00533 1210 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 TGFB3P10600 412 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PBLDP30039 288 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF273Q14593 569 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PTGES3Q15185 160 aaKnown RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 NDUFAF5Q5TEU4 345 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CLECL1Q8IZS7 167 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 RNF175Q8N4F7 328 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 APOLD1Q96LR9 279 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 RAD9AQ99638 391 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 NUDT15Q9NV35 164 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 TXNL4BQ9NX01 149 aaKnown RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF624Q9P2J8 865 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 COL2A1P02458 1487 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 GABRDO14764 452 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CSO75390 466 aaKnown RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 APOC3P02656 99 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 SMPD1P17405 629 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CHMP24386 653 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 GBX2P52951 348 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 LIMK1P53667 647 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 SOX4Q06945 474 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 RIN1Q13671 783 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PAN2Q504Q3 1202 aaKnown RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 CALHM3Q86XJ0 350 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PIANPQ8IYJ0 282 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PIAS4Q8N2W9 510 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 ANKRD53Q8N9V6 530 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 SRFBP1Q8NEF9 429 aaKnown RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PPP1R14AQ96A00 147 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 AP1S3Q96PC3 154 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PIGUQ9H490 435 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 SEC14L4Q9UDX3 406 aa7.17□□□□□ -1.26
CPSF6-202ENST00000435070 PLEKHB1Q9UF11 243 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-202ENST00000435070 SLC35F4A4IF30 521 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 STX16O14662 325 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 BET1O15155 118 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 F9P00740 461 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 HBQ1P09105 142 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 RRASP10301 218 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 DNASE1P24855 282 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 GKP32189 559 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 CDC42P60953 191 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 CSTF1Q05048 431 aaKnown RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 SF1Q15637 639 aaKnown RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 OR8K3Q8NH51 312 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 SCAMP5Q8TAC9 235 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 BCL7CQ8WUZ0 217 aaPredicted RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 HMCESQ96FZ2 354 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 COPS8Q99627 209 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 SAP130Q9H0E3 1048 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 SLC25A13Q9UJS0 675 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 EXO1Q9UQ84 846 aaKnown RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 RAI2Q9Y5P3 530 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 MYLKQ15746 1914 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 GRXCR2A6NFK2 248 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 H3BN98 237 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 GNB5O14775 395 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 RPP40O75818 363 aaKnown RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 KDM4BO94953 1096 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 RFX3P48380 749 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 TAF6P49848 677 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 GZMMP51124 257 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 CLDN20P56880 219 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 ELOAQ14241 798 aaKnown RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 FGD2Q7Z6J4 655 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 GPAT4Q86UL3 456 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 CIR1Q86X95 450 aaPredicted RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 MS4A15Q8N5U1 240 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 CELF5Q8N6W0 485 aaKnown RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 COQ10AQ96MF6 247 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 GPR137Q96N19 417 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 RBP7Q96R05 134 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 C12orf57Q99622 126 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 TRIM62Q9BVG3 475 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 IFT22Q9H7X7 185 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 HEXA-AS1Q9H8Q6 139 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 SERHLQ9NQF3 203 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 PCDHB16Q9NRJ7 776 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 CLEC4AQ9UMR7 237 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 STUB1Q9UNE7 303 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 PCDHGA2Q9Y5H1 932 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 EP400Q96L91 3159 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 BRCA1P38398 1863 aaKnown RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 LOC730098B7Z3J9 87 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 IFRD1O00458 451 aaPredicted RBP7.16□□□□□ -1.26
CPSF6-202ENST00000435070 FPGTO14772 594 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 WNT9AO14904 365 aa7.16□□□□□ -1.26
CPSF6-202ENST00000435070 CELF2O95319 508 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms