RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TXNDC9O14530 226 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 SCAMP2O15127 329 aaKnown RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 GSC2O15499 205 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 FLRT2O43155 660 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 SH3BP5O60239 455 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 LRATO95237 230 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 PGRP06401 933 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 SMIM10L1P0DMW3 83 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 NQO1P15559 274 aaKnown RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 HIST1H1TP22492 207 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 S100A3P33764 101 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 MLLT3P42568 568 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 TAS2R50P59544 299 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 DAB2P98082 770 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 UGT8Q16880 541 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 FAM71E1Q6IPT2 247 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 MSANTD1Q6ZTZ1 278 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 KMT5CQ86Y97 462 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 MCATQ8IVS2 390 aaKnown RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 PGAM4Q8N0Y7 254 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 ZCCHC7Q8N3Z6 543 aaKnown RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 KCT2Q8NC54 265 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 CDC26Q8NHZ8 85 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 MTERF3Q96E29 417 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 SMIM10Q96HG1 83 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 RAB3IPQ96QF0 476 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 PRPF18Q99633 342 aaKnown RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 DPYSL5Q9BPU6 564 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 CADM1Q9BY67 442 aaKnown RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 MMADHCQ9H3L0 296 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 REEP4Q9H6H4 257 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 ATP6V1HQ9UI12 483 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 RRP15Q9Y3B9 282 aaKnown RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 C4orf51C9J302 202 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 TOX3O15405 576 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 AKAP10O43572 662 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 RASSF9O75901 435 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 NPPAP01160 153 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 ATP5A1P25705 553 aaKnown RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 GABRA4P48169 554 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 DGKQP52824 942 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 CORO7P57737 925 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 CLPPQ16740 277 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 TMEM71Q6P5X7 295 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 ZNF793Q6ZN11 406 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 USP53Q70EK8 1073 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 ABHD13Q7L211 337 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 R3HCC1LQ7Z5L2 792 aaKnown RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 ARHGAP24Q8N264 748 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 DPP10Q8N608 796 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 CSNK1A1LQ8N752 337 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 OR8J2Q8NGG1 315 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 UTP15Q8TED0 518 aaKnown RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 GFM2Q969S9 779 aaKnown RBP17.32■□□□□ 0.36
HMGN1-206ENST00000431390 MCUR1Q96AQ8 359 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 ZNF285Q96NJ3 590 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 GID8Q9NWU2 228 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 SOHLH2Q9NX45 425 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 MAP10Q9P2G4 905 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 PLCL2Q9UPR0 1127 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 BTBD3Q9Y2F9 522 aa17.32■□□□□ 0.36
HMGN1-206ENST00000431390 UNC13CQ8NB66 2214 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 A0A088AWK7 358 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 TMPRSS11DO60235 418 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 CPNE6O95741 557 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 ZNF888P0CJ79 500 aaPredicted RBP17.31■□□□□ 0.36
HMGN1-206ENST00000431390 COX7A2P14406 83 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 ZNF10P21506 573 aaPredicted RBP17.31■□□□□ 0.36
HMGN1-206ENST00000431390 KIR3DL1P43629 444 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 VSX2P58304 361 aaPredicted RBP17.31■□□□□ 0.36
HMGN1-206ENST00000431390 KCNJ2P63252 427 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 KLC1Q07866 573 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 C2orf80Q0P641 193 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 SLC14A1Q13336 389 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 PDE7AQ13946 482 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 SLC9A5Q14940 896 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 MRM1Q6IN84 353 aaKnown RBP17.31■□□□□ 0.36
HMGN1-206ENST00000431390 TMEM214Q6NUQ4 689 aaKnown RBP17.31■□□□□ 0.36
HMGN1-206ENST00000431390 RIPOR1Q6ZS17 1223 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 GPR180Q86V85 440 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 DEFB107AQ8IZN7 70 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 IFI44Q8TCB0 444 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 NUDT8Q8WV74 236 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 TM4SF18Q96CE8 201 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 OR52E6Q96RD3 313 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 LRRN3Q9H3W5 708 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 COPS7BQ9H9Q2 264 aaPredicted RBP17.31■□□□□ 0.36
HMGN1-206ENST00000431390 WDR41Q9HAD4 459 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 KLHL3Q9UH77 587 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 EXO1Q9UQ84 846 aaKnown RBP17.31■□□□□ 0.36
HMGN1-206ENST00000431390 ASXL3Q9C0F0 2248 aa17.31■□□□□ 0.36
HMGN1-206ENST00000431390 DMXL2Q8TDJ6 3036 aa17.3■□□□□ 0.36
HMGN1-206ENST00000431390 A0A0G2JN53 185 aa17.3■□□□□ 0.36
HMGN1-206ENST00000431390 A0A1W2PQM1 296 aa17.3■□□□□ 0.36
HMGN1-206ENST00000431390 HCRTR1O43613 425 aa17.3■□□□□ 0.36
HMGN1-206ENST00000431390 TBX19O60806 448 aa17.3■□□□□ 0.36
HMGN1-206ENST00000431390 GUCY1B2O75343 617 aa17.3■□□□□ 0.36
HMGN1-206ENST00000431390 EIF2S1P05198 315 aaKnown RBP17.3■□□□□ 0.36
HMGN1-206ENST00000431390 RPLP0P05388 317 aaKnown RBP17.3■□□□□ 0.36
HMGN1-206ENST00000431390 IL3P08700 152 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms