RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 SLC13A2Q13183 592 aa16.49■□□□□ 0.23
NUP50-208ENST00000430547 ADPRMQ3LIE5 342 aa16.49■□□□□ 0.23
NUP50-208ENST00000430547 PRAMEF9Q5VWM5 478 aa16.49■□□□□ 0.23
NUP50-208ENST00000430547 ADNP2Q6IQ32 1131 aa16.49■□□□□ 0.23
NUP50-208ENST00000430547 MED27Q6P2C8 311 aa16.49■□□□□ 0.23
NUP50-208ENST00000430547 VN1R5Q7Z5H4 357 aa16.49■□□□□ 0.23
NUP50-208ENST00000430547 MYLK4Q86YV6 388 aaPredicted RBP16.49■□□□□ 0.23
NUP50-208ENST00000430547 FAM47BQ8NA70 645 aa16.49■□□□□ 0.23
NUP50-208ENST00000430547 SRFBP1Q8NEF9 429 aaKnown RBP16.49■□□□□ 0.23
NUP50-208ENST00000430547 KCNC2Q96PR1 638 aa16.49■□□□□ 0.23
NUP50-208ENST00000430547 ROGDIQ9GZN7 287 aa16.49■□□□□ 0.23
NUP50-208ENST00000430547 NECTIN3Q9NQS3 549 aa16.49■□□□□ 0.23
NUP50-208ENST00000430547 PRTFDC1Q9NRG1 225 aa16.49■□□□□ 0.23
NUP50-208ENST00000430547 USP9YO00507 2555 aaPredicted RBP16.49■□□□□ 0.23
NUP50-208ENST00000430547 SPTAN1Q13813 2472 aaKnown RBP16.48■□□□□ 0.23
NUP50-208ENST00000430547 IGKV3D-11A0A0A0MRZ8 115 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 A8MUA0 341 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 CRYABP02511 175 aaKnown RBP16.48■□□□□ 0.23
NUP50-208ENST00000430547 GP1BBP13224 206 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 EPORP19235 508 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 CERS1P27544 350 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 SERPINB1P30740 379 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 CASP2P42575 452 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 SERPINB9P50453 376 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 ALDH18A1P54886 795 aaKnown RBP16.48■□□□□ 0.23
NUP50-208ENST00000430547 HSD17B7P56937 341 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 OC90Q02509 493 aaPredicted RBP16.48■□□□□ 0.23
NUP50-208ENST00000430547 RUNX2Q13950 521 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 SETDB1Q15047 1291 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 PFKFB4Q16877 469 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 ZNF766Q5HY98 468 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 ABHD17CQ6PCB6 329 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 TEX9Q8N6V9 391 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 HORMAD2Q8N7B1 307 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 CEP112Q8N8E3 955 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 C5orf34Q96MH7 638 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 QRFPRQ96P65 431 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 PSMG3-AS1Q96PY0 264 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 F2RL3Q96RI0 385 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 ANKRD10Q9NXR5 420 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 CPSF2Q9P2I0 782 aaKnown RBP16.48■□□□□ 0.23
NUP50-208ENST00000430547 SLC5A6Q9Y289 635 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 SPACA6W5XKT8 324 aa16.48■□□□□ 0.23
NUP50-208ENST00000430547 HMX2A2RU54 273 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 SYNDIG1LA6NDD5 238 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 GABRR3A8MPY1 467 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 E2F3O00716 465 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 KRT38O76015 456 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 DDAH2O95865 285 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 ALDOAP04075 364 aaKnown RBP16.47■□□□□ 0.23
NUP50-208ENST00000430547 MTHFD2P13995 350 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 TUBA3CQ13748 450 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 NAA30Q147X3 362 aaPredicted RBP16.47■□□□□ 0.23
NUP50-208ENST00000430547 UBAP2Q5T6F2 1119 aaKnown RBP16.47■□□□□ 0.23
NUP50-208ENST00000430547 GRHL2Q6ISB3 625 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 TUBA3EQ6PEY2 450 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 CHSY3Q70JA7 882 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 RPS19BP1Q86WX3 136 aaKnown RBP16.47■□□□□ 0.23
NUP50-208ENST00000430547 ZNF595Q8IYB9 648 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 LAS2Q8IYD9 372 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 LGI4Q8N135 537 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 ELP5Q8TE02 316 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 SLC44A1Q8WWI5 657 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 PAFAH2Q99487 392 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 SLX1AQ9BQ83 275 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 CENPKQ9BS16 269 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 TBCDQ9BTW9 1192 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 MS4A8Q9BY19 250 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 FUT8Q9BYC5 575 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 CDCP1Q9H5V8 836 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 ACTR8Q9H981 624 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 PNO1Q9NRX1 252 aaKnown RBP16.47■□□□□ 0.23
NUP50-208ENST00000430547 ADGRE2Q9UHX3 823 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 TNPO3Q9Y5L0 923 aaKnown RBP16.47■□□□□ 0.23
NUP50-208ENST00000430547 UTP20O75691 2785 aaKnown RBP16.47■□□□□ 0.23
NUP50-208ENST00000430547 ICE1Q9Y2F5 2266 aa16.47■□□□□ 0.23
NUP50-208ENST00000430547 A0A087WUV0 522 aaPredicted RBP16.46■□□□□ 0.23
NUP50-208ENST00000430547 POC1B-GALNT4F8VUJ3 575 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 MYO1DO94832 1006 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 TBX6O95947 436 aaPredicted RBP16.46■□□□□ 0.23
NUP50-208ENST00000430547 CD46P15529 392 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 ARL1P40616 181 aaPredicted RBP16.46■□□□□ 0.23
NUP50-208ENST00000430547 PIK3CGP48736 1102 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 LIM2P55344 173 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 PHEXP78562 749 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 DDX39BQ13838 428 aaKnown RBP16.46■□□□□ 0.23
NUP50-208ENST00000430547 E2F2Q14209 437 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 TERF2Q15554 542 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 OR1C1Q15619 314 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 AP5B1Q2VPB7 878 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 TMEM35AQ53FP2 167 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 SCUBE1Q8IWY4 988 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 KIF2BQ8N4N8 673 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 TMEM178AQ8NBL3 297 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 OR7G3Q8NG95 312 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 DNAJB8Q8NHS0 232 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 ZNF473Q8WTR7 871 aaKnown RBP16.46■□□□□ 0.23
NUP50-208ENST00000430547 NR4A3Q92570 626 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 CMTM7Q96FZ5 175 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 TAAR6Q96RI8 345 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms