RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 FAM159BA6NKW6 160 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 DISC1C4P0D8 188 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 PRAMEF11O60813 436 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 RNGTTO60942 597 aaKnown RBP14.85□□□□□ -0.03
PTPRF-206ENST00000429895 EBLN1P0CF75 366 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 SLC9A3P48764 834 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 MRPL49Q13405 166 aaKnown RBP14.85□□□□□ -0.03
PTPRF-206ENST00000429895 RAET1LQ5VY80 246 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 NRROSQ86YC3 692 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 CILP2Q8IUL8 1156 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 SLC35F5Q8WV83 523 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 NLE1Q9NVX2 485 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-206ENST00000429895 TAS2R1Q9NYW7 299 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 NLGN3Q9NZ94 848 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 ZNF35P13682 527 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 HADHBP55084 474 aaKnown RBP14.85□□□□□ -0.03
PTPRF-206ENST00000429895 RPS21P63220 83 aaKnown RBP14.85□□□□□ -0.03
PTPRF-206ENST00000429895 ST3GAL4Q11206 333 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 SEC23BQ15437 767 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 DCAF12L1Q5VU92 463 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 ZDHHC24Q6UX98 284 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 SLC35B2Q8TB61 432 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 SMARCD2Q92925 531 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 TSACCQ96A04 125 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-206ENST00000429895 OR10A4Q9H209 315 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 ZNF701Q9NV72 531 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-206ENST00000429895 SMCO3A2RU48 225 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 A6NLC8 198 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 DUSP3P51452 185 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-206ENST00000429895 ANKDD1AQ495B1 522 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 NLGN4YQ8NFZ3 816 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-206ENST00000429895 SCAMP4Q969E2 229 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 LRRC46Q96FV0 321 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 DEFB126Q9BYW3 111 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 STOX2Q9P2F5 926 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-206ENST00000429895 MEN1O00255 615 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 CAPN5O15484 640 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-206ENST00000429895 HERC3Q15034 1050 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 CYP1B1Q16678 543 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 ERI1Q8IV48 349 aaKnown RBP14.85□□□□□ -0.03
PTPRF-206ENST00000429895 MINDY2Q8NBR6 621 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 RADILQ96JH8 1075 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 FAM83CQ9BQN1 747 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 FN3KQ9H479 309 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 Q9Y3F1 56 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 SLC22A1O15245 554 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 CFL1P23528 166 aaKnown RBP14.84□□□□□ -0.03
PTPRF-206ENST00000429895 HNF1BP35680 557 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 STC1P52823 247 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 SRYQ05066 204 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 ATXN7L3Q14CW9 347 aaPredicted RBP14.84□□□□□ -0.03
PTPRF-206ENST00000429895 RABL3Q5HYI8 236 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 FAM69BQ5VUD6 431 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 ZNF100Q8IYN0 542 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 TCEANCQ8N8B7 351 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 FAM120CQ9NX05 1096 aaKnown RBP14.84□□□□□ -0.03
PTPRF-206ENST00000429895 FEZF1A0PJY2 475 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 TP53I11O14683 189 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 LAMTOR5O43504 91 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 ZNF84P51523 738 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 MEP1AQ16819 746 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 UGT8Q16880 541 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 USP53Q70EK8 1073 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 BIRC7Q96CA5 298 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 S100A16Q96FQ6 103 aaKnown RBP14.84□□□□□ -0.03
PTPRF-206ENST00000429895 DLDP09622 509 aaKnown RBP14.84□□□□□ -0.03
PTPRF-206ENST00000429895 H2BFMP0C1H6 154 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 CTBP2P56545 445 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 PLCXD2Q0VAA5 305 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 TGFBIQ15582 683 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 NCEH1Q6PIU2 408 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 OTUB2Q96DC9 234 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 PADI2Q9Y2J8 665 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 BACE2Q9Y5Z0 518 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 OTOL1A6NHN0 477 aaPredicted RBP14.84□□□□□ -0.03
PTPRF-206ENST00000429895 ABLIM1O14639 778 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 TSPAN6O43657 245 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 ASGR2P07307 311 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 GRPRP30550 384 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 SERINC3Q13530 473 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 ZNF630Q2M218 657 aaPredicted RBP14.84□□□□□ -0.03
PTPRF-206ENST00000429895 ZNF805Q5CZA5 627 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 FAM76BQ5HYJ3 339 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 SYCE2Q6PIF2 218 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 ASPGQ86U10 573 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 LINC00471Q8N535 108 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 AKAP1Q92667 903 aaKnown RBP eCLIP14.84□□□□□ -0.033e-7■■■□□ 19.2
PTPRF-206ENST00000429895 A0A1W2PPK0 400 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 BHMG1C9JSJ3 638 aaPredicted RBP14.84□□□□□ -0.03
PTPRF-206ENST00000429895 JUNDP17535 347 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 SLC25A11Q02978 314 aaKnown RBP14.84□□□□□ -0.03
PTPRF-206ENST00000429895 CMASQ8NFW8 434 aaPredicted RBP14.84□□□□□ -0.03
PTPRF-206ENST00000429895 OR51G2Q8NGK0 314 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 SPHK2Q9NRA0 654 aa14.84□□□□□ -0.03
PTPRF-206ENST00000429895 XPNPEP2O43895 674 aa14.83□□□□□ -0.03
PTPRF-206ENST00000429895 TUBG1P23258 451 aa14.83□□□□□ -0.03
PTPRF-206ENST00000429895 OR4D2P58180 307 aa14.83□□□□□ -0.03
PTPRF-206ENST00000429895 LMAN2Q12907 356 aa14.83□□□□□ -0.03
PTPRF-206ENST00000429895 XKRXQ6PP77 449 aa14.83□□□□□ -0.03
PTPRF-206ENST00000429895 TMEM151BQ8IW70 566 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 574.9 ms