RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 LAPTM4AQ15012 233 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SMN1Q16637 294 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 DEFB115Q30KQ5 88 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 RNF212Q495C1 297 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 ATPAF1Q5TC12 328 aaPredicted RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 RASSF6Q6ZTQ3 369 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 LRRC8DQ7L1W4 858 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 C5orf24Q7Z6I8 188 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 THOC6Q86W42 341 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 CCDC71Q8IV32 467 aaPredicted RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 CDAN1Q8IWY9 1227 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 PGBD5Q8N414 524 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 TMEM151AQ8N4L1 468 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SLC44A3Q8N4M1 653 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SLC35B2Q8TB61 432 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 UCN3Q969E3 161 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 FAM122AQ96E09 287 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 AURKBQ96GD4 344 aaPredicted RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 GPR78Q96P69 363 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 QKIQ96PU8 341 aaKnown RBP eCLIP4.2□□□□□ -1.742e-6■■■■□ 22.3
R3HDM1-206ENST00000429703 TCF25Q9BQ70 676 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 ATG101Q9BSB4 218 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 EGLN1Q9GZT9 426 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 ING2Q9H160 280 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SMOC1Q9H4F8 434 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 FAM96AQ9H5X1 160 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 NSUN3Q9H649 340 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 B3GAT2Q9NPZ5 323 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 PDLIM7Q9NR12 457 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 AGPAT3Q9NRZ7 376 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 RASSF1Q9NS23 344 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 ADARB2Q9NS39 739 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 C19orf12Q9NSK7 152 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SLC17A6Q9P2U8 582 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 CDH9Q9ULB4 789 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SLC39A10Q9ULF5 831 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 IRAK3Q9Y616 596 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 CACNA1SQ13698 1873 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 DOCK1Q14185 1865 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 LCHNA4D1U4 455 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 EREGO14944 169 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 ARPC2O15144 300 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SEMA7AO75326 666 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SGPL1O95470 568 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 GLUD1P00367 558 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 INHBAP08476 426 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SBK3P0C264 359 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 CBSLP0DN79 551 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 TFE3P19532 575 aaPredicted RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 PSMB9P28065 219 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 CBSP35520 551 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 LHX1P48742 406 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 KIAA1024LP59773 190 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 ZP1P60852 638 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 ART3Q13508 389 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 NAE1Q13564 534 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 GRIN2CQ14957 1233 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 ALG11Q2TAA5 492 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 USP39Q53GS9 565 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SPANXN2Q5MJ10 180 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 MTFR2Q6P444 385 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 TRMT10BQ6PF06 316 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SV2BQ7L1I2 683 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 DENND6AQ8IWF6 608 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 PPIL6Q8IXY8 311 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 KATNAL2Q8IYT4 538 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 ENTHD1Q8IYW4 607 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 UXS1Q8NBZ7 420 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 PPHLN1Q8NEY8 458 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 CD99L2Q8TCZ2 262 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 APH1BQ8WW43 257 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 DCAF5Q96JK2 942 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 LRR1Q96L50 414 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 HHIPQ96QV1 700 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 KCNJ15Q99712 375 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 KCNS3Q9BQ31 491 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 H2AFJQ9BTM1 129 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 PI4K2AQ9BTU6 479 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 POTEKPQ9BYX7 375 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SDCBP2Q9H190 292 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 NXF3Q9H4D5 531 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 CCDC86Q9H6F5 360 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 OPA3Q9H6K4 179 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SMURF2Q9HAU4 748 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 SMURF1Q9HCE7 757 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 NEUROD4Q9HD90 331 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 NSMCE4AQ9NXX6 385 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 NDUFAF4Q9P032 175 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 FOXD3Q9UJU5 478 aaPredicted RBP4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 ANAPC7Q9UJX3 599 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 ADAM30Q9UKF2 790 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 STUB1Q9UNE7 303 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 RNF6Q9Y252 685 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 BCS1LQ9Y276 419 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 MAB21L2Q9Y586 359 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 PCDHB14Q9Y5E9 798 aa4.2□□□□□ -1.74
R3HDM1-206ENST00000429703 MIA3Q5JRA6 1907 aa4.19□□□□□ -1.74
R3HDM1-206ENST00000429703 BTBD17A6NE02 478 aa4.19□□□□□ -1.74
R3HDM1-206ENST00000429703 COLCA2A8K830 154 aa4.19□□□□□ -1.74
R3HDM1-206ENST00000429703 G3V2T6 193 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms